Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 2e-24
seq3 96.9 3e-15
seq10 84.2 2e-11
>seq5
Length=3432170
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
|||| || ||| | ||||| || || | || ||||| || || | | ||| ||| | |
Sbjct 765295 TTGTCAAGACTCTGACCGGCAAGACAATTACCCTTGAGGTTGAGTCTAGCGACACCATCG 765236
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
|| || | || || || || || |||||||||||||| ||||| ||||||||||| |
Sbjct 765235 ACAATGTGAAGACGAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAACAACGTCTGA 765176
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| ||||||||||| ||| | |||||| ||| ||| | || || |||||||| || || |
Sbjct 765175 TCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGG 765116
Query 22409 AATCCACC 22416
||||||||
Sbjct 765115 AATCCACC 765108
Score = 116 bits (128), Expect = 3e-21
Identities = 130/174 (75%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || ||| ||| ||| | || | ||||
Sbjct 765582 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACCATCGATAACGTCAAGACC 765523
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| || |||||||| ||||| || ||||||||||| || || || |||||||||
Sbjct 765522 AAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAACAACGCCTGATCTTCGCCGGCAAA 765463
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| ||| ||| | ||||| ||||||||||| ||||| || |||
Sbjct 765462 CAGCTTGAGGACGGCCGTACCCTTTCCGACTACAACATTCAGAAAGAGTCTACC 765409
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | || || || || |||| | || ||||| | ||
Sbjct 765077 ATGCAAATCTTTGTCAAGACTCTTACAGGAAAGACCATCACCTTGGAGGTGGAGTCATCC 765018
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || ||| |||||||||||||||||||| || || |||||
Sbjct 765017 GACACAATCGACAACGTAAAGACAAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAG 764958
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || || || | || ||| ||||| |||| || ||||||
Sbjct 764957 CAGCGTCTCATTTTCGCTGGAAAGCAACTTGAAGATGGTCGCACACTCTCGGACTACAAC 764898
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || ||||||||
Sbjct 764897 ATTCAGAAGGAATCCAC 764881
>seq3
Length=4187442
Score = 96.9 bits (106), Expect = 3e-15
Identities = 120/161 (75%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 129734 CACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTT 129793
|||||||||||||||| || | ||||| || | | |||||| ||||||| ||| |
Sbjct 1408037 CACTGTACTCGACAATCTCTGTGCACAGGTTGGAACTGCGAATGGTTCCCAAATTCTTCT 1408096
Query 129794 GATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTT 129853
| || || ||| ||||||||||||| ||||||| |||| | || |||| || ||| ||
Sbjct 1408097 GGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTTT 1408156
Query 129854 GCGTTTCGACAATGGTCCTGAACA-AGTCTC-GAGCCTTGA 129892
| | ||| | ||||| | | || ||| || |||||||||
Sbjct 1408157 GAGCTTCCAAAATGG--CATACCAGAGTTTCTGAGCCTTGA 1408195
>seq10
Length=1400945
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
||||||||||||||| || || || || || || || || || |||||||| ||| | ||
Sbjct 852823 AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 852882
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
||| |||||| ||||||| |||||||| || || || |||| | || | || |
Sbjct 852883 GGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGAGCACCCTGCACCTCGTCCT 852942
Query 22431 GCGATTGCGCGGAGGT 22446
||| |||| || |||
Sbjct 852943 GCGTCTGCGTGGTGGT 852958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727600996070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |