Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 seq3 96.9 3e-15 seq10 84.2 2e-11 >seq5 Length=3432170 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 |||| || ||| | ||||| || || | || ||||| || || | | ||| ||| | | Sbjct 765295 TTGTCAAGACTCTGACCGGCAAGACAATTACCCTTGAGGTTGAGTCTAGCGACACCATCG 765236 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 || || | || || || || || |||||||||||||| ||||| ||||||||||| | Sbjct 765235 ACAATGTGAAGACGAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAACAACGTCTGA 765176 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | ||||||||||| ||| | |||||| ||| ||| | || || |||||||| || || | Sbjct 765175 TCTTTGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGG 765116 Query 22409 AATCCACC 22416 |||||||| Sbjct 765115 AATCCACC 765108 Score = 116 bits (128), Expect = 3e-21 Identities = 130/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| ||| ||| | || | |||| Sbjct 765582 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACCATCGATAACGTCAAGACC 765523 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| || |||||||| ||||| || ||||||||||| || || || ||||||||| Sbjct 765522 AAGATTCAGGATAAGGAGGGCATTCCCCCTGATCAACAACGCCTGATCTTCGCCGGCAAA 765463 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||| ||| | ||||| ||||||||||| ||||| || ||| Sbjct 765462 CAGCTTGAGGACGGCCGTACCCTTTCCGACTACAACATTCAGAAAGAGTCTACC 765409 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || ||| | || || || || |||| | || ||||| | || Sbjct 765077 ATGCAAATCTTTGTCAAGACTCTTACAGGAAAGACCATCACCTTGGAGGTGGAGTCATCC 765018 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| |||||||||||||||||||| || || ||||| Sbjct 765017 GACACAATCGACAACGTAAAGACAAAGATTCAAGACAAGGAGGGTATCCCTCCGGATCAG 764958 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || || | || ||| ||||| |||| || |||||| Sbjct 764957 CAGCGTCTCATTTTCGCTGGAAAGCAACTTGAAGATGGTCGCACACTCTCGGACTACAAC 764898 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || |||||||| Sbjct 764897 ATTCAGAAGGAATCCAC 764881 >seq3 Length=4187442 Score = 96.9 bits (106), Expect = 3e-15 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 129734 CACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTT 129793 |||||||||||||||| || | ||||| || | | |||||| ||||||| ||| | Sbjct 1408037 CACTGTACTCGACAATCTCTGTGCACAGGTTGGAACTGCGAATGGTTCCCAAATTCTTCT 1408096 Query 129794 GATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTT 129853 | || || ||| ||||||||||||| ||||||| |||| | || |||| || ||| || Sbjct 1408097 GGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTTT 1408156 Query 129854 GCGTTTCGACAATGGTCCTGAACA-AGTCTC-GAGCCTTGA 129892 | | ||| | ||||| | | || ||| || ||||||||| Sbjct 1408157 GAGCTTCCAAAATGG--CATACCAGAGTTTCTGAGCCTTGA 1408195 >seq10 Length=1400945 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || || || || || || || || || |||||||| ||| | || Sbjct 852823 AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 852882 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||| |||||| ||||||| |||||||| || || || |||| | || | || | Sbjct 852883 GGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGAGCACCCTGCACCTCGTCCT 852942 Query 22431 GCGATTGCGCGGAGGT 22446 ||| |||| || ||| Sbjct 852943 GCGTCTGCGTGGTGGT 852958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727600996070