Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3 125 1e-23 seq6 96.9 7e-15 >seq3 Length=4187442 Score = 125 bits (138), Expect = 1e-23 Identities = 295/440 (67%), Gaps = 24/440 (5%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || | ||||| || |||||||||||| |||||||| ||| Sbjct 3256085 TCGAAGAAGTTGGTCTTACCGGCGAGAGAAATGGACTCCATGAAGTCAAAGGGGTTGGTG 3256144 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 || ||| |||| |||| | ||| || || || | | |||||| || || ||||| Sbjct 3256145 GCGTTGAAGTACTTCTTG---TTGCCGAGAGCAACCAGCAGGCGGTCAGCGACGAACTCG 3256201 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | ||||| | ||| || | |||||||||||| | | ||||| | || || | Sbjct 3256202 ATGTACTGGCACATGAGCTTAGAGTTCATGCCGAGGAGGGCGCAAGGGAGAGCATCCGTG 3256261 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC-------TGTGC 251792 | ||| |||||||| | | || ||||| | | || ||| || || | Sbjct 3256262 AGGAACTCCTTTTCAATAGAGACGGCCTCAACGATGATGTCCTCGACAACCTTATTGGAC 3256321 Query 251793 CAGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAAA-CTGTTGGTGCAGA 251850 | | ||| ||| || | ||| | || || | || ||| | || ||| ||| Sbjct 3256322 GGGCGCCAG-TTG------AGGTGAGAGAATAGCAGGCAGGCGAAATCAGT--GTGGAGA 3256372 Query 251851 CCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTC 251910 |||||||| || ||||| ||||||||| | || || ||||||| ||||| ||| Sbjct 3256373 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACCACGCTTC 3256432 Query 251911 CTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 | ||||||||||| | | ||| || |||||||| | | ||||||||| | | Sbjct 3256433 TTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAGATACCCTCGACGGCAGCAAAG 3256492 Query 251971 GCAACAAGGCGCTCAGCAAA 251990 ||||||||||||| |||||| Sbjct 3256493 GCAACAAGGCGCTGAGCAAA 3256512 >seq6 Length=3207549 Score = 96.9 bits (106), Expect = 7e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||| |||||||| || |||| ||||| || || ||||||| ||||||||||| || Sbjct 858846 AGGCGAGGATCTTTGCAACTGCACATTCTCTCTGGCCTATGGTGCCAAGATTCTGCTGAA 858787 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | ||| || | | ||||||||| | || || ||||| |||| ||||| || | Sbjct 858786 CCAGACCAAGCTTCGCTTGAAGCGTGGCCAGCGTTACGGTCTGCTCGGACCCAACGGTAC 858727 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| |||||| ||||| ||||| |||| ||||| || || || || || Sbjct 858726 CGGAAAGACCACTCTCATGCGTGCCATCAACAACGAGCAGCTCGAGGGCTTCCCCAAGAA 858667 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGA 279556 ||||| | ||| || || || |||||||| Sbjct 858666 GGACGAGGTCAAGACTGTCTACGTCGAGCACGA 858634 Score = 91.5 bits (100), Expect = 3e-13 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 280690 CCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTG 280749 ||||| || || ||||||| ||| |||||||| || || |||||| ||||| | | Sbjct 857455 CCGAGCTTGTCACCCACTCTCACATGCGCGGTCTCTCCGGTGGCCAGCGCGTCAAGGTCG 857396 Query 280750 TCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAAC 280808 || ||| || || | ||||| | || ||||| |||||||| ||||||||||||||| Sbjct 857395 TCCTCGCCGCCTGCACA-TGGCAGCGTCCCCACGTCATCGTTCTGGACGAGCCTACCAAC 857337 Query 280809 TATCTGGACCGCGA 280822 ||||| ||||| || Sbjct 857336 TATCTCGACCGTGA 857323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835772805598