Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5 199 7e-46 seq3 187 5e-42 seq13 123 5e-23 >seq5 Length=3432170 Score = 199 bits (220), Expect = 7e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 || || || |||||||| | |||||||| |||||| ||| || |||||||| || ||| Sbjct 764620 TTGCCACCACGAAGGCGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 764679 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 ||||| || | |||||||| |||||||| || ||||| ||||| | ||| ||||| || Sbjct 764680 GAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGGG 764739 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 ||||| |||||||| ||||||||||| | ||||||| || |||||||| | || Sbjct 764740 GGAATTCCTTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTCTCA 764799 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 764800 ACCTCCAATGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| |||||||| || || || ||||| || || ||| Sbjct 764851 CCACCACGCAGACGGAGGACAAGGTGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAG 764910 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | ||||| || ||||| ||||| | || || || || || Sbjct 764911 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGG 764970 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||||| ||| ||| ||||| ||||| | ||| || || Sbjct 764971 ATACCCTCCTTGTCTTGAATCTTTGTCTTTACGTTGTCGATTGTGTCGGATGACTCCACC 765030 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| ||||| || || |||||||| || || ||||| Sbjct 765031 TCCAAGGTGATGGTCTTTCCTGTAAGAGTCTTGACAAAGATTTGCAT 765077 Score = 127 bits (140), Expect = 4e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || |||||||| || ||||| || ||||| Sbjct 765380 CCACCACGCAGACGAAGCACGAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAA 765439 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||| || |||||||| || || | |||||| || || ||| Sbjct 765440 AGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAGGCGTTGTTGATCAGGGGGA 765499 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| ||||| || |||||||| | ||||||| ||||||||||| ||| || || || Sbjct 765500 ATGCCCTCCTTATCCTGAATCTTGGTCTTGACGTTATCGATGGTGTC-GCTGGACTCGAC 765558 Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 765559 CTCAAGGGTGATGGTCTTGCCAGT 765582 Score = 125 bits (138), Expect = 1e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || ||||| || || |||||||| || || || Sbjct 765079 CCACCACGGAGGCGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 765138 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | |||||||||||| ||| Sbjct 765139 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 765198 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || ||||| || || ||||| | ||| || ||||||||||| ||| || || || Sbjct 765199 ATACCCTCCTTATCCTGGATCTTCGTCTTCACATTGTCGATGGTGTC-GCTAGACTCAAC 765257 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || | ||| || || || || || || |||||||| Sbjct 765258 CTCAAGGGTAATTGTCTTGCCGGTCAGAGTCTTGAC 765293 >seq3 Length=4187442 Score = 187 bits (206), Expect = 5e-42 Identities = 324/470 (69%), Gaps = 6/470 (1%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| ||| || | Sbjct 3256048 CATGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGGC 3256107 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| |||||| ||||||||||||||||||||| |||| || | ||| || || Sbjct 3256108 GAGAGAAATGGACTCCATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCC 3256167 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| ||||||||||||||||||| ||| || | ||||| Sbjct 3256168 GAGAGCAACCAGCAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTAGAGTT 3256227 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | ||| |||| || || | ||| |||||||| | | ||| || Sbjct 3256228 CATGCCGAGGAGGGCGCAAGGGAGAGCATCCGTGAGGAACTCCTTTTCAATAGAGACGGC 3256287 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGAC---AGCTTGTTCTCGAGCTTCGAATA 10231 || ||| |||| || || || | | |||| || ||| ||| | || | Sbjct 3256288 CTCAACGATGATGTCCTCGACAACCTTATTGGACGGGCGCCAGTT---GAGGTGAGAGAA 3256344 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 || || | || | |||||| |||||||| ||| ||||| ||||||||| || Sbjct 3256345 TAGCAGGCAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAA 3256404 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 ||||||||||| || || || || ||||||||| |||| | ||||| || || Sbjct 3256405 GGTAAGACCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGA 3256464 Query 10352 GAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 ||| | | |||||| ||| | |||| || ||||||| || |||| Sbjct 3256465 GAAGAAGATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGG 3256514 >seq13 Length=847613 Score = 123 bits (136), Expect = 5e-23 Identities = 137/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 149091 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 149032 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || || || || |||||||| || ||||| | ||||||| ||| Sbjct 149031 AGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 148972 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 148971 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 148913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621501418160