Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 129 1e-24 seq13 102 2e-16 >seq5 Length=3432170 Score = 129 bits (142), Expect = 1e-24 Identities = 170/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | || | |||||| || || ||||| || ||||||| | Sbjct 764623 CCACCACGAAGGCGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 764682 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| ||||| ||||| || || || || ||||| || ||||| || || |||||| Sbjct 764683 AGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGG---TCTGGG 764739 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 |||||||| ||||| || || || | || ||||| || || | ||| ||| Sbjct 764740 GGAATTCCTTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTC--- 764796 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||||||||| ||||| || ||||||||||| |||||||| Sbjct 764797 TCAACCTCCAATGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||| ||| || ||||| || ||||| | Sbjct 765079 CCACCACGGAGGCGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 765138 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || || ||||||||||| ||||| || Sbjct 765139 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGA 765198 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| |||| ||||| || || || | ||||| || || || Sbjct 765199 ATACCCTCCTTATCCTGGATCTTCGTCTTCACATTGTCGATGGTGTCGCTAGACTCAACC 765258 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || || || ||||| ||||||||||||||||| Sbjct 765259 TCAAGGGTAATTGTCTTGCCGGTCAGAGTCTTGAC 765293 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | |||| ||| || || || || ||||| | | Sbjct 764851 CCACCACGCAGACGGAGGACAAGGTGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAG 764910 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| ||||| ||||| || |||||||| ||| ||| Sbjct 764911 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGG 764970 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || || || || | || ||||| || || | ||| || || || Sbjct 764971 ATACCCTCCTTGTCTTGAATCTTTGTCTTTACGTTGTCGATTGTGTCGGATGACTCCACC 765030 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || || ||||||||||| || || ||||| Sbjct 765031 TCCAAGGTGATGGTCTTTCCTGTAAGAGTCTTGACAAAGATTTGCAT 765077 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| |||| || ||||| || || || ||||||| Sbjct 765380 CCACCACGCAGACGAAGCACGAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAA 765439 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||||| || ||||||||||| || |||||| | || Sbjct 765440 AGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAGGCGTTGTTGATCAGGGGGA 765499 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || || | || ||||| || || | ||||| || || || Sbjct 765500 ATGCCCTCCTTATCCTGAATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGACC 765559 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| || || Sbjct 765560 TCAAGGGTGATGGTCTTGCCAGT 765582 >seq13 Length=847613 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || || || || || || | || || || ||||||||| Sbjct 149091 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 149032 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || ||||| || || || |||||||| || | || ||||| || Sbjct 149031 AGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 148972 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 148971 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 148913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653221082884