Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 165 8e-36 seq13 102 8e-17 seq5 96.9 3e-15 >seq3 Length=4187442 Score = 165 bits (182), Expect = 8e-36 Identities = 356/530 (67%), Gaps = 23/530 (4%) Strand=Plus/Minus Query 52318 TCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCG 52377 ||||| || || ||| || ||| |||||||| ||||| || |||||||| || | Sbjct 3256583 TCGAGATAGTCCCATGCATTAACAAGAAGGCTCAATGGGCCATCAAGTGGATTCAGGACC 3256524 Query 52378 ACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGttttttt 52437 | |||| | || ||||| | || ||||| || |||||||| | || || | Sbjct 3256523 AGGAGTCCACCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCT 3256464 Query 52438 CCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGT 52497 | ||| |||||| ||||||| | | || | | || | |||||||| || || | Sbjct 3256463 CTGGCTCGTTTGCCTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCT 3256404 Query 52498 TCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT----- 52552 || ||||||| | || || || ||||| || || ||||| || || || ||||| Sbjct 3256403 TCTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGATTTCGCCTGCCTGCTAT 3256344 Query 52553 ---CT-ACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGT 52608 || || ||| |||| | || | || | | ||||| ||| || Sbjct 3256343 TCTCTCACCTCAACTGGCGCCCGTCCAATAAGGTTGTCGAGGACATCATC--------GT 3256292 Query 52609 TCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGC 52668 | ||||| || |||| ||||||||||| | |||| || || || || || | Sbjct 3256291 T----GAGGCCGTCTCTATTGAAAAGGAGTTCCTCACGGATGCTCTCCCTTGCGCCCTCC 3256236 Query 52669 TGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGG 52728 | ||||||||| | || ||||||| ||||||||||||| || || || || ||| ||| Sbjct 3256235 TCGGCATGAACTCTAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGCTGG 3256176 Query 52729 TGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAAC 52787 | ||||| || | | |||||||||||||| ||| || ||||| || ||| | | Sbjct 3256175 TTGCTCTCGG-CAACAAGAAGTACTTCAACGCCACCAACCCCTTTGACTTCATGGAGTCC 3256117 Query 52788 ATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| || | || ||||||||||| ||||||||||| || || || || Sbjct 3256116 ATTTCTCTCGCCGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 3256067 Score = 104 bits (114), Expect = 2e-17 Identities = 292/439 (67%), Gaps = 11/439 (3%) Strand=Plus/Plus Query 154025 GTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTT---TCCGCCCTG 154081 ||||||||||||||| |||| ||||| || | |||||| |||||| ||| || || Sbjct 1408477 GTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCCTTG 1408536 Query 154082 ATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGT 154141 ||| |||| | | | |||||||| || || | |||||| | ||| | | | Sbjct 1408537 ATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGACGA 1408596 Query 154142 GCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAAT 154201 || ||||| | |||| | || || || | | || ||||| | ||||| Sbjct 1408597 TCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTGAGACCAAT 1408656 Query 154202 GCCGCC-GCCGTACTTTGATATGGCAGCGCAG-TCGCCCA-GCGTCCTGTAGATGCCGTC 154258 || || || || |||||| || ||| ||| || | | | ||| |||||| || || Sbjct 1408657 CCCACCAGCAGT-CTTTGAAATCATAGCACAGGTCTTCAATGTGTC--GTAGATACCCTC 1408713 Query 154259 GATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCC 154318 ||| || || || | | ||| || ||| || ||| | || || | | || || Sbjct 1408714 GATACTGTCTTCCTTCATGTCGACCAGGAAGCAAGAAGCTAGCTGAGGCTGGGGAGTACC 1408773 Query 154319 CGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGT 154378 ||| || ||||| || ||||| || || | || ||| ||||| | |||||| Sbjct 1408774 CGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGTACGT 1408833 Query 154379 TTCGATGGCGTCT-TCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGT 154437 ||||||||| ||| || ||||| | ||| ||||| |||| || || ||||| |||| | Sbjct 1408834 TTCGATGGC-TCTCTCAATATCGTTGCCATGAATACCGACAGCAACACGCATCAGCAAAT 1408892 Query 154438 GCTGCGGACGTTCGGCGAC 154456 |||| ||||| ||||| || Sbjct 1408893 GCTGAGGACGCTCGGCAAC 1408911 >seq13 Length=847613 Score = 102 bits (112), Expect = 8e-17 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||||| ||||| || || || |||| ||| Sbjct 149093 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 149034 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| |||||||| || ||||| || ||||| || | || || || | ||| Sbjct 149033 TCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 148975 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 148974 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 148916 Query 138603 AAAA 138606 ||| Sbjct 148915 GAAA 148912 >seq5 Length=3432170 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| || ||||| |||||||| || || |||| | Sbjct 765112 GATTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCA 765171 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 |||| ||||| |||||||| ||||| ||||| || || || ||| || | || | Sbjct 765172 AAGATCAGACGTTGTTGGTCGGGAGGAATACCCTCCTTATCCTGGATCTTCGTCTTCACA 765231 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| | ||||| ||||| | || | || || || |||||||| || Sbjct 765232 TTG-TCGATGGTGTCGCTAGACTCAACCTCAAGGGTAATTGTCTTGCCGGTCAGAGTCTT 765290 Query 138600 TACAA 138604 |||| Sbjct 765291 GACAA 765295 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478 || ||||| |||||||||||||| | ||| |||| || || ||||| || || | Sbjct 764884 GATTCCTTCTGAATGTTGTAGTCCG--AGAGTGTGCGACCATCTTCAAGTTGCTTTCCAG 764941 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGT-TTT 138537 | || |||||||| || |||||||| ||||| || ||||| ||| | ||||| ||| Sbjct 764942 CGAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCT-TGAATCTTTGTCTTT 765000 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||||||| ||||||||||| | || | || || || || ||||| Sbjct 765001 ACGTTGTCGATTGTGTCGGATGACTCCACCTCCAAGGTGATGGTCTTTCCTGTAAGAGTC 765060 Query 138598 TTTACAAAAATCTGCAT 138614 || ||||| || ||||| Sbjct 765061 TTGACAAAGATTTGCAT 765077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261916144160