Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 3e-36
>seq3
Length=4187442
Score = 167 bits (184), Expect = 3e-36
Identities = 365/539 (68%), Gaps = 42/539 (8%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| || || ||||||||||||||||| ||||| || |||| || ||||||
Sbjct 3256066 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGGCGAGAGAAATGGACTCCAT 3256125
Query 127291 AAAATCAAATGGGTT-----CTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAG 127344
|| ||||| ||||| | |||| | | |||||| | | ||| | ||
Sbjct 3256126 GAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCCGAGAGCAACC------AG 3256179
Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404
|| || || | |||| |||| ||||||| |||| || ||||||||| |||| |||
Sbjct 3256180 CAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTAGAGTTCATGCCGAGGAG 3256239
Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464
| || ||||| || ||| || |||| |||| ||||| || || || |||||
Sbjct 3256240 GGCGCAAGGGAGAGCATCCGTGAGGAACTCCTTTTCAATAGAGACGGCCTCA---ACGAT 3256296
Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTG------CGTAAAGTCT--TGA-AGAGTTC 127515
| ||||| | || ||||| || | | ||| ||| |
Sbjct 3256297 GA---------TGTCCTCGACAACCTTATTGGACGGGCGCCAGTTGAGGTGAGAGAATAG 3256347
Query 127516 CA--CAG-CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCA 127572
|| ||| | || || ||||||||||||||||||||||||||| || || ||||||
Sbjct 3256348 CAGGCAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGT 3256407
Query 127573 CAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAA 127632
||||| ||||| ||||| |||||||||| |||||| || | ||| |||||||||||
Sbjct 3256408 AAGACCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAA 3256467
Query 127633 GAAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TT 127690
|||||| ||||| || || || |||| || |||| ||||||| ||||| |
Sbjct 3256468 GAAGATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGG---TGGACTCCTG 3256524
Query 127691 GT-ATCAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGA 127748
|| | || |||||| || ||||| || ||||| || | || |||||||| ||| ||
Sbjct 3256525 GTCCTGAATCCACTTGATGGCCCATTGAGCCTTCTTGTTAATGCATGGGACTATCTCGA 3256583
Score = 95.1 bits (104), Expect = 1e-14
Identities = 165/239 (69%), Gaps = 12/239 (5%)
Strand=Plus/Plus
Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACT 12932
||||| | ||| || ||||| |||||||| | |||||||||| |||| |||||
Sbjct 1946757 TTACCAATGGCATCGATTTCATCAATGAAGATGATACACGGTGTGTTTTTGCGGGCGTTG 1946816
Query 12933 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 12992
|||| | |||||| || | | ||||||||| ||||||||||||||||| |
Sbjct 1946817 GCAAAAAGATCTCGAACACGGGAAGGACCGACACCGACAAACATCTCCACAAACT----- 1946871
Query 12993 GCGGAA-CATTG-----GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046
| ||| || || || |||||| || || || || || ||||| ||| |||
Sbjct 1946872 -CTGAACCACTGACGCTGAAGAAGGGCACACCAGACTCGCCGGCAGTGGCTTTGGCAAGG 1946930
Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105
|| || || || || ||||| || | ||||| ||||||||| || ||| | || ||
Sbjct 1946931 AGTGTTTTACCAGTTCCTGGAGGACCGGAGAGAATGGCACCACGAGGAATCTTTGCGCC 1946989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506601830480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |