Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 3e-26
seq5 96.9 3e-14
seq11 93.3 3e-13
>seq6
Length=3207549
Score = 136 bits (150), Expect = 3e-26
Identities = 387/593 (65%), Gaps = 4/593 (1%)
Strand=Plus/Minus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
||| | ||||| ||| | |||||||| || || || ||| | | | ||| |
Sbjct 1581579 GCTGTCGGTATCGATCTGGGAACCACCTACTCCTGCGTGGGTATCTTCCGCGATGATCGC 1581520
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
|||| || |||||||| || || || | || || ||||| | || | |||||
Sbjct 1581519 ATTGATATCATTGCCAACGACCAGGGCTCTCGCACCACCCCATCCTTCGTCGCCTTCACC 1581460
Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171
|| ||||| | ||| | || || | ||| || | || | | | || ||| |||
Sbjct 1581459 GACACTGAGCGTTTGCTCGGCGAGGGAGCCAAGAACCAGGTCGCCATGAACCCTTTCAAC 1581400
Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231
|| | || |||||||| ||||| || || | | |||| ||| | ||||||||
Sbjct 1581399 ACCGTCTTCGATGCTAAGCGTTTGATCGGTCGTCGCTTTACAGATGCTGAGGTTCAGGCT 1581340
Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291
||||||||||| ||||| ||| | | || | ||||| || ||||| | |
Sbjct 1581339 GATATGAAGCACTGGCCCTTCAAGGTCGTCGACAAGGGCGGAAAGCCCGTCATTGAGGTT 1581280
Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349
| ||| | || | || ||||| | || || |||| || || |||||| | |
Sbjct 1581279 GAATTCAAGGGCGAGACG--AAGCAATTCACCCCCGAGGAAATCTCTTCCATGGTTCTGA 1581222
Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409
|| ||| | || ||| ||||| ||||| || || | |||| || | |
Sbjct 1581221 CCAAGATGCGTGAGACCGCCGAGGCTTTCCTTGGTGAAACTGTCAACAATGCTGTCGTTA 1581162
Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469
|||| || || || || |||||||| || ||||| || || || |||||||| | |||||
Sbjct 1581161 CTGTCCCCGCGTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCTTATTG 1581102
Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529
|||| | || ||||| ||||| ||||| || || ||||||||||| |||| || || |
Sbjct 1581101 CTGGCTTGAACGTTCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATTGCTTACGGTC 1581042
Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582
|||| || | || || | ||||| || ||||||||| ||| |||
Sbjct 1581041 TTGACAAGAAGGTCGAGGGCGAGCGCAATGTTCTTATCTTTGATCTTGGTGGT 1580989
>seq5
Length=3432170
Score = 96.9 bits (106), Expect = 3e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| || || || ||| || ||| ||||| || | || || |
Sbjct 764860 AGACGGAGGACAAGGTGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGA 764919
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|||||||||||| ||||| || ||||| || | |||||||| ||||| || || ||
Sbjct 764920 CCATCTTCAAGTTGCTTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCC 764979
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
|| |||||||| ||| ||||| || ||||| || | ||| | || || | ||
Sbjct 764980 TTGTCTTGAATCTTTGTCTTTACGTTGTCGATTGTGTC-GGATGACTCCACCTCCAAGGT 765038
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| || || || |||||||| || || || |||||||||
Sbjct 765039 GATGGTCTTTCCTGTAAGAGTCTTGACAAAGATTTGCATA 765078
>seq11
Length=1040584
Score = 93.3 bits (102), Expect = 3e-13
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || || ||||| || ||||| || || ||| ||||| || ||||| || |||||
Sbjct 36006 GCGGTCATCACTGTTCCCGCATACTTCAACGACAACCAACGCCAGGCTACCAAGGATGCC 35947
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| ||| || || || |||||||| ||||| ||||| || ||||||||||| || ||
Sbjct 35946 GGTGCTATCGCCGGGCTCAATGTTCTCCGTATCATCAACGAGCCTACTGCTGCGGCCATT 35887
Query 550520 GCATATGGACT 550530
|| ||||| ||
Sbjct 35886 GCTTATGGTCT 35876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029291875008220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |