Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 136 3e-26 seq5 96.9 3e-14 seq11 93.3 3e-13 >seq6 Length=3207549 Score = 136 bits (150), Expect = 3e-26 Identities = 387/593 (65%), Gaps = 4/593 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| ||| | |||||||| || || || ||| | | | ||| | Sbjct 1581579 GCTGTCGGTATCGATCTGGGAACCACCTACTCCTGCGTGGGTATCTTCCGCGATGATCGC 1581520 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||| || |||||||| || || || | || || ||||| | || | ||||| Sbjct 1581519 ATTGATATCATTGCCAACGACCAGGGCTCTCGCACCACCCCATCCTTCGTCGCCTTCACC 1581460 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | ||| | || || | ||| || | || | | | || ||| ||| Sbjct 1581459 GACACTGAGCGTTTGCTCGGCGAGGGAGCCAAGAACCAGGTCGCCATGAACCCTTTCAAC 1581400 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | || |||||||| ||||| || || | | |||| ||| | |||||||| Sbjct 1581399 ACCGTCTTCGATGCTAAGCGTTTGATCGGTCGTCGCTTTACAGATGCTGAGGTTCAGGCT 1581340 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||| ||||| ||| | | || | ||||| || ||||| | | Sbjct 1581339 GATATGAAGCACTGGCCCTTCAAGGTCGTCGACAAGGGCGGAAAGCCCGTCATTGAGGTT 1581280 Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | ||| | || | || ||||| | || || |||| || || |||||| | | Sbjct 1581279 GAATTCAAGGGCGAGACG--AAGCAATTCACCCCCGAGGAAATCTCTTCCATGGTTCTGA 1581222 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||| | || ||| ||||| ||||| || || | |||| || | | Sbjct 1581221 CCAAGATGCGTGAGACCGCCGAGGCTTTCCTTGGTGAAACTGTCAACAATGCTGTCGTTA 1581162 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 |||| || || || || |||||||| || ||||| || || || |||||||| | ||||| Sbjct 1581161 CTGTCCCCGCGTACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCTTATTG 1581102 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 |||| | || ||||| ||||| ||||| || || ||||||||||| |||| || || | Sbjct 1581101 CTGGCTTGAACGTTCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATTGCTTACGGTC 1581042 Query 550530 TTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 |||| || | || || | ||||| || ||||||||| ||| ||| Sbjct 1581041 TTGACAAGAAGGTCGAGGGCGAGCGCAATGTTCTTATCTTTGATCTTGGTGGT 1580989 >seq5 Length=3432170 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| ||||| || || || ||| || ||| ||||| || | || || | Sbjct 764860 AGACGGAGGACAAGGTGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGA 764919 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||||||||| ||||| || ||||| || | |||||||| ||||| || || || Sbjct 764920 CCATCTTCAAGTTGCTTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCC 764979 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || |||||||| ||| ||||| || ||||| || | ||| | || || | || Sbjct 764980 TTGTCTTGAATCTTTGTCTTTACGTTGTCGATTGTGTC-GGATGACTCCACCTCCAAGGT 765038 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || || |||||||| || || || ||||||||| Sbjct 765039 GATGGTCTTTCCTGTAAGAGTCTTGACAAAGATTTGCATA 765078 >seq11 Length=1040584 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| || ||||| || || ||| ||||| || ||||| || ||||| Sbjct 36006 GCGGTCATCACTGTTCCCGCATACTTCAACGACAACCAACGCCAGGCTACCAAGGATGCC 35947 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || ||| || || || |||||||| ||||| ||||| || ||||||||||| || || Sbjct 35946 GGTGCTATCGCCGGGCTCAATGTTCTCCGTATCATCAACGAGCCTACTGCTGCGGCCATT 35887 Query 550520 GCATATGGACT 550530 || ||||| || Sbjct 35886 GCTTATGGTCT 35876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291875008220