Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq5 105 4e-17 >seq5 Length=3432170 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| || || || ||| || || || || || | || || Sbjct 764856 ACGCAGACGGAGGACAAGGTGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGTGT 764915 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||||||||||||||| ||||| ||||| || ||||| ||||| || || Sbjct 764916 GCGACCATCTTCAAGTTGCTTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGGATACC 764975 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||||||||| || || || || || || | || | | | ||| Sbjct 764976 CTCCTTGTCTTGAATCTTTGTCTTTACGTTGTCGATTGTGTCGGATGACTCCACCTCCAA 765035 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || |||||||| || || ||||| Sbjct 765036 -GGTGATGGTCTTTCCTGTAAGAGTCTTGACAAAGATTTG 765074 Score = 100 bits (110), Expect = 2e-15 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | ||||| ||||| ||||| |||||||| || || || |||||||||||||| Sbjct 764694 ATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTT 764753 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||||||||||| ||||| ||||| || || | | | | || | ||| || | Sbjct 764754 ATCTTGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTCTCAACCTCCAA-TGTGA 764812 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || |||||||| ||||| |||||||| || Sbjct 764813 TCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTG 764846 Score = 86.0 bits (94), Expect = 4e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || || ||||| || ||| || | || || |||| || || Sbjct 765084 ACGGAGGCGGAGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGT 765143 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| || ||||| || ||||||||||| || |||||||| || Sbjct 765144 ACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACC 765203 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729 ||||| || || ||||| || ||| || || || || | | | || |||| Sbjct 765204 CTCCTTATCCTGGATCTTCGTCTTCACATTGTCGATGGTGTCGCTAGACTCAA-CCTCAA 765262 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760 ||||||| || || ||||| |||||||| || Sbjct 765263 GGGTAATTGTCTTGCCGGTCAGAGTCTTGAC 765293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268175854201544