Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq16 136 5e-26 seq6 136 5e-26 seq3 125 9e-23 >seq16 Length=607608 Score = 136 bits (150), Expect = 5e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| ||||||||||| || || || | || |||||| | || |||||| Sbjct 311086 GCCGCCAACTACCTTGACATCAAGCCCCTCCTTGACATCGGCTGCAAGACCGTCGCCAAC 311027 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||| ||||||||||| ||||||||||| |||||||||||||||||| || ||| Sbjct 311026 ATGATTAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACCTTTAACATCCAGAACG 310972 >seq6 Length=3207549 Score = 136 bits (150), Expect = 5e-26 Identities = 113/138 (82%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||||||||| || || ||| |||||||| || | || ||||||||| Sbjct 1965026 GACAGCATCGGCGGCACGGTAACCTGTGTGATCCGCAACGTTCCCGTGGGACTCGGCGAG 1965085 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| |||||| ||||||||||| ||||| || ||| Sbjct 1965086 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCTCACGCCATGCTCAGCATCCCCGCAACC 1965145 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| |||||||| ||| Sbjct 1965146 AAGGGCTTCGAGATCGGC 1965163 >seq3 Length=4187442 Score = 125 bits (138), Expect = 9e-23 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || |||| || || Sbjct 3256058 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGGCGAGAGAAATG 3256117 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | || ||||||| | ||| ||| ||| | | ||||| | | Sbjct 3256118 GACTCCATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCCGAGAGCAACC 3256177 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||| | Sbjct 3256178 AGCAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTAGAGTTCATGCCGAGG 3256237 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || | | ||||| || || || ||||||||| |||||| Sbjct 3256238 AGGGCGCAAGGGAGAGCATCCGTGAGGAACTCCTTTTCAATAGAGACGGCCTCAACGATG 3256297 Query 868931 AT 868932 || Sbjct 3256298 AT 3256299 Score = 104 bits (114), Expect = 3e-16 Identities = 142/195 (73%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | |||||| |||| || |||||||| || || ||||| Sbjct 3256372 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACCACGCTT 3256431 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | || ||| ||||| ||||| ||||||||||| ||||| Sbjct 3256432 CTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAGATACCCTCGACGGCAGCAAA 3256491 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT--TG-ATCCACTTCATCGC 869355 | | | || |||| ||||||||| || ||||| || || |||||||| || || Sbjct 3256492 GGCAACAAGGCGCTGAGCAAAGGTG--GA----CTCCTGGTCCTGAATCCACTTGATGGC 3256545 Query 869356 CCAGTCGGCCTTTTT 869370 ||| | ||||| || Sbjct 3256546 CCATTGAGCCTTCTT 3256560 Score = 86.0 bits (94), Expect = 8e-11 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 1628388 CAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCG 1628447 || ||| || || ||| || || ||||| | ||| || ||| || | | | || Sbjct 1408321 CAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTCCAATCACCATTGGCCTCGACACGCTT 1408380 Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| || ||||| ||||| || || || || ||||| || || | |||||||| Sbjct 1408381 CATGAATAGGTCGGGGGTCCAAAGAGCATAGAACAGGTCACGGGCTCTCACTTCCTCCTT 1408440 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||||||||||| ||||| | | |||| || |||||||||||| ||||| ||||| Sbjct 1408441 TCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAAAACGTCGGCGTGCCAGGGCTCAAGGTA 1408500 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTG 1628592 | |||||||| ||| |||||| Sbjct 1408501 GATAGCAAAGGCACCCGGACGCTTG 1408525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107132798954726