Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq16 140 5e-27 seq3 122 1e-21 >seq16 Length=607608 Score = 140 bits (154), Expect = 5e-27 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| ||||||||||||||||| || | || ||||||||||| |||||| Sbjct 311086 GCCGCCAACTACCTTGACATCAAGCCCCTCCTTGACATCGGCTGCAAGACCGTCGCCAAC 311027 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | || ||||||||||| |||||||| || |||||||||||||||||| || ||| Sbjct 311026 ATGATTAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACCTTTAACATCCAGAACG 310972 >seq3 Length=4187442 Score = 122 bits (134), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| || ||| Sbjct 3256050 TGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGGCGA 3256109 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | || || ||||||| | || ||||||| | | ||| ||||| | |||| Sbjct 3256110 GAGAAATGGACTCCATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCCGA 3256169 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | ||||||||||| |||||||| || ||||||||||||||||| | ||||| Sbjct 3256170 GAGCAACCAGCAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTAGAGTTCA 3256229 Query 794071 TGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 |||||| ||| || || ||| || | || ||| ||||| || || || ||||||| Sbjct 3256230 TGCCGAGGAGGGCGCAAGGG-AGAGCATCCGTGAGGAACTCCTTTTCAATAGAGACGGCC 3256288 Query 794130 TCGATGATGAT 794140 || | |||||| Sbjct 3256289 TCAACGATGAT 3256299 Score = 93.3 bits (102), Expect = 7e-13 Identities = 140/196 (71%), Gaps = 11/196 (6%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| ||| || |||||||| || || ||||| Sbjct 3256372 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAGACCACGCTT 3256431 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||| ||||| ||||||| | |||| ||| ||||| ||||| ||||||||||| |||| Sbjct 3256432 CTTCAGCCAGAAGATGG-AGGCAAACGAGCCAGAGAAGAAGATACCCTCGACGGCAGCAA 3256490 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTG---TCCAGGCCCTCTTTGTTGATCCACTTCATCG 794515 || | || || |||| ||||| ||| ||| || || | |||||||| || | Sbjct 3256491 AGGCAACAAGGCGCTGAGCAAAGGTGGACTCCTGGTCC------TGAATCCACTTGATGG 3256544 Query 794516 CCCACTCTGCCTTTTT 794531 |||| | ||||| || Sbjct 3256545 CCCATTGAGCCTTCTT 3256560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916238102784242