Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 4e-12 >seq3 Length=4187442 Score = 87.8 bits (96), Expect = 4e-12 Identities = 309/474 (65%), Gaps = 9/474 (2%) Strand=Plus/Minus Query 110517 GCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTT 110576 ||||||||||| || | | || || || || ||| || ||||| || || | || Sbjct 1408752 GCTTCTTGCTTCCTGGTCGACATGAAGGAAGACAGTATCGAGGGTATCTACGACACA-TT 1408694 Query 110577 AAAGAAAC-TGCTCTTATTTCTAAAAACT-CTGGAGGAATTGGTATTCACGTTCATGATA 110634 |||| |||| | ||||| ||| ||| |||| || |||||| | ||||||| | Sbjct 1408693 GAAGACCTGTGCTATGATTTC-AAAGACTGCTGGTGGGATTGGTCTCAACGTTCACCGCA 1408635 Query 110635 TTCGCTCAAAAGGAGCAAATATC-GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCA 110693 | || | | ||| | | ||| | | | | || | | |||| ||| || | || Sbjct 1408634 TCCGTGCTACTGGATCTTACATCAGTGGTACCAATGGATCGTCCAAC-GGAATTCTCCCC 1408576 Query 110694 ATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT--- 110750 ||| | |||| |||||| |||| || | ||| || ||||||| || || | | Sbjct 1408575 ATGCTTCGAGTTTTCAACAACACCGCTAGATACGTTGATCAAGGAGGAAACAAGCGTCCG 1408516 Query 110751 GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTT 110810 || | ||||||||||| || || || ||||| | || | || || ||||| || || Sbjct 1408515 GGTGCCTTTGCTATCTACCTTGAGCCCTGGCACGCCGACGTTTTCGAGTTCTTGGACCTG 1408456 Query 110811 CGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATT 110870 || || || || ||| || ||| ||||| ||||| | || ||||| | |||| Sbjct 1408455 CGCAAGAACCACGGAAAGGAGGAAGTGAGAGCCCGTGACCTGTTCTATGCTCTTTGGACC 1408396 Query 110871 TCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT 110930 | || |||||||||| ||||| | | ||||| ||| | || | || ||| | Sbjct 1408395 CCCGACCTATTCATGAAGCGTGTCGAGGCCAATGGTGATTGGACCCTCTTCTGCCCTAAC 1408336 Query 110931 CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAA 110984 | ||||| | | ||||| ||||| | |||||||| | ||||||||| Sbjct 1408335 GAAGCCCCTGGCTTGGCAGATGTCTATGGCGACGAGTTTGATGCTCTTTACGAA 1408282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811613928958