Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 165 1e-35 >seq3 Length=4187442 Score = 165 bits (182), Expect = 1e-35 Identities = 408/616 (66%), Gaps = 10/616 (2%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || || || || | ||||| |||| ||||| ||| || || || | | | | Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || || ||| ||| || || ||||| ||||| ||||| |||||||||| ||| || Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 || || | || ||| ||| || ||||| || || || || | ||||| | Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 || || | ||||| || || || || || || | | | ||||| || || |||||||| Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||||| | |||||| || ||||| || | |||| ||||| || | ||| || || || Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACC 69875 ||||| || ||| || ||| ||| | || || || || ||||| Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTGAGACC 1408653 Query 69876 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTC 69935 || || || || | || || || | |||||| ||||||||||| || |||||||| Sbjct 1408654 AATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCCTC 1408713 Query 69936 TATGCTATCATCTATCATGT----TAAGAAGAAAACAGCTAGACATTTGATGATGTATAG 69991 || || || || |||||| | |||| || |||||| ||| | || || Sbjct 1408714 GATACTGTCTTCCTTCATGTCGACCAGGAAGCAAGAAGCTAG----CTGAGGCTGGGGAG 1408769 Query 69992 TTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT 70051 | |||||||| || | || || || ||||| ||||| | || | || | ||| |||| Sbjct 1408770 TACCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGT 1408829 Query 70052 ATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACA 70111 | ||||| || ||| || ||||| |||||| || | || |||||||||| || Sbjct 1408830 ACGTTTCGATGGCTCTCTCAATATCGTTGCCATGAATACCGACAGCAACACGCATCAGCA 1408889 Query 70112 TATGCTGAGGTCGTTC 70127 ||||||||| || || Sbjct 1408890 AATGCTGAGGACGCTC 1408905 Score = 100 bits (110), Expect = 4e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||| ||| || || ||||| || | || | ||||| || || || || Sbjct 3256351 GCAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAG 3256410 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||||||||| || ||||| || |||| ||||| || ||||| ||||| Sbjct 3256411 ACCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAA 3256470 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||| || || || || ||||| |||||||| Sbjct 3256471 GATACCCTCGACGGCAGCAAAGGCAACAAG 3256500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908130263920