Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 2e-26
>seq3
Length=4187442
Score = 134 bits (148), Expect = 2e-26
Identities = 160/214 (75%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790
||| || || ||| | ||||| || | ||||| || |||||| || | || | ||||
Sbjct 3256576 AGTCCCATGCATTAACAAGAAGGCTCAATGGGCCATCAAGTGGATTCAGGACCAGGAGTC 3256517
Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
|||||||| |||| || | || ||||| || ||||||||||||||||||||
Sbjct 3256516 CA---CCTTTGCTCAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGG 3256460
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
|| || | | || | ||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct 3256459 CTCGTTTGCCTCCATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTC 3256400
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
||||||||| ||||| ||||||||||| ||||||
Sbjct 3256399 CAACGAGCTCATCTCCCGTGACGAGGGTCTCCAC 3256366
Score = 122 bits (134), Expect = 1e-22
Identities = 169/235 (72%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 9695 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 9754
|| || | |||||| || ||||||||||||| ||| || ||| |||| ||| |||
Sbjct 1946757 TTACCAATGGCATCGATTTCATCAATGAAGATGATACACGGTGTGTTTTTGCGGGCGTTG 1946816
Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 9812
|||| ||||| || ||||| | || ||||| ||||||||||||||||| | ||
Sbjct 1946817 GCAAAAAGATCTCGAACACGGGAAGGACCGACACCGACAAACATCTCCACAAACTCTGAA 1946876
Query 9813 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872
| | || | || |||||| ||| ||| || || ||| ||||| ||| || || |
Sbjct 1946877 CCACTGACGCT--GAAGAAGGGCACACCAGACTCGCCGGCAGTGGCTTTGGCAAGGAGTG 1946934
Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
| ||||| || ||||| ||| | ||| | |||||| || |||||||| |||||
Sbjct 1946935 TTTTACCAGTTCCTGGAGGACCGGAGAGAATGGCACCACGAGGAATCTTTGCGCC 1946989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260231320720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |