Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 6e-11 >seq8 Length=1828511 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/187 (72%), Gaps = 6/187 (3%) Strand=Plus/Plus Query 52724 GAAGCTCGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGACAAGTTTGC 52783 |||| | ||||| ||| | ||||| | ||| | ||| |||| ||||||||||| || Sbjct 1004389 GAAGTTTGTCAAAGTGCGCATGAGGACGACCAAGATCCCGCAGATTGGCGACAAGTTCGC 1004448 Query 52784 GTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGAC-CCAGGAGGACATGCCC 52841 ||| ||||||| |||||||| || ||| ||| | |||||| || |||||| Sbjct 1004449 CTCGCGTCACGGC-CAAAAGGGTACAATCGGTATTA-CCTATCGCCAGGAAGATATGCCC 1004506 Query 52842 TTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAG 52900 ||| || | || || || ||||| || |||||||||||||||||| |||| || | Sbjct 1004507 TTC-ACTCGCGAGGGTGTTACACCCGATCTTATCATCAACCCCCACGCCATTCCGTCTCG 1004565 Query 52901 GATGACC 52907 |||||| Sbjct 1004566 TATGACC 1004572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310013751176