Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 7e-22
seq10 82.4 5e-11
>seq5
Length=3432170
Score = 118 bits (130), Expect = 7e-22
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535
|| ||| || | ||| || | ||||| ||||| ||||||||||| || ||||| || ||
Sbjct 764619 GTTGCCACCACGAAGGCGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC 764678
Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595
|| || || || | ||||| | || ||||| || || || | ||| || ||||| ||
Sbjct 764679 GGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGG 764738
Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCT 34654
|| | ||| ||||| ||| ||| || || || ||| || ||| ||||| |||||
Sbjct 764739 GGGAATTCCTTCCTTATCT-TGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTCT 764797
Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || |||| || ||||| || ||||| | || || || |||||||||||
Sbjct 764798 CAACCTCCAATGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849
Score = 104 bits (114), Expect = 1e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| ||||| |||||||| || || || ||||| || | |||||||||||
Sbjct 764875 TGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCATCTTCAAGTTGC 764934
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || || || || | |||||| || ||||| || | |||||||||||| ||| ||
Sbjct 764935 TTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCT-TGAATCTT 764993
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
||| || ||| | |||||||| |||||| |||| ||| || || || || ||
Sbjct 764994 TGTCTTTACGTTGTCGATTGTGTCGGATGACTCCACCTCCAAGGTGATGGTCTTTCCTGT 765053
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || || ||||| || |||||
Sbjct 765054 AAGAGTCTTGACAAAGATTTGCAT 765077
>seq10
Length=1400945
Score = 82.4 bits (90), Expect = 5e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| || | || || ||||||||||| || ||||| || || || || || ||
Sbjct 852948 AGACGCAGGACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGA 852889
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || || ||||| || || | ||||| ||||| || || | ||||||
Sbjct 852888 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCC 852829
Query 34609 TTGTCTGT 34616
||||||||
Sbjct 852828 TTGTCTGT 852821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729300810174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |