Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5 118 7e-22 seq10 82.4 5e-11 >seq5 Length=3432170 Score = 118 bits (130), Expect = 7e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | ||| || | ||||| ||||| ||||||||||| || ||||| || || Sbjct 764619 GTTGCCACCACGAAGGCGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC 764678 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 || || || || | ||||| | || ||||| || || || | ||| || ||||| || Sbjct 764679 GGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGG 764738 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCT 34654 || | ||| ||||| ||| ||| || || || ||| || ||| ||||| ||||| Sbjct 764739 GGGAATTCCTTCCTTATCT-TGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTCT 764797 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || |||| || ||||| || ||||| | || || || ||||||||||| Sbjct 764798 CAACCTCCAATGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849 Score = 104 bits (114), Expect = 1e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||| |||||||| || || || ||||| || | ||||||||||| Sbjct 764875 TGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCATCTTCAAGTTGC 764934 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | |||||| || ||||| || | |||||||||||| ||| || Sbjct 764935 TTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCT-TGAATCTT 764993 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 ||| || ||| | |||||||| |||||| |||| ||| || || || || || Sbjct 764994 TGTCTTTACGTTGTCGATTGTGTCGGATGACTCCACCTCCAAGGTGATGGTCTTTCCTGT 765053 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || ||||| || ||||| Sbjct 765054 AAGAGTCTTGACAAAGATTTGCAT 765077 >seq10 Length=1400945 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| || | || || ||||||||||| || ||||| || || || || || || Sbjct 852948 AGACGCAGGACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGA 852889 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || ||||| || || | ||||| ||||| || || | |||||| Sbjct 852888 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCC 852829 Query 34609 TTGTCTGT 34616 |||||||| Sbjct 852828 TTGTCTGT 852821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729300810174