Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 134 3e-26 seq13 98.7 2e-15 >seq5 Length=3432170 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| |||||||| || || | ||||| || | | || | |||||| Sbjct 764866 AGGACAAGGTGGAGCGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCATCT 764925 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||| || || || || || || || || ||||| ||||||||| Sbjct 764926 TCAAGTTGCTTTCCAGCGAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCT 764985 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| || ||||| ||||| || | ||||| || || ||||| ||| Sbjct 764986 TGAATCTTTGTCTTTACGTTGTCGATTGTGTCGGATGACTCCACCTCCAAGGTGATGGTC 765045 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | || | |||||| Sbjct 765046 TTTCCTGTAAGAGTCTTGACAAAGATTTGCAT 765077 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || |||||||| || |||| ||||| || | || || | ||||| Sbjct 765094 AGAACGAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 765153 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || |||||||||||||| |||||||| ||||| || Sbjct 765154 TCGAGCTGCTTGCCGGCAAAGATCAGACGTTGTTGGTCGGGAGGAATACCCTCCTTATCC 765213 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| | || || || | || || ||| Sbjct 765214 TGGATCTTCGTCTTCACATTGTCGATGGTGTCGCTAGACTCAACCTCAAGGGTAATTGTC 765273 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||| || Sbjct 765274 TTGCCGGTCAGAGTCTT 765290 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| | |||||| ||| || || |||| ||||| |||| | || Sbjct 764628 ACGAAGGCGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGT 764687 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| |||||||| || || ||||| ||||| || ||||| || Sbjct 764688 ACGTCCATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGGGGGAATTCC 764747 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||| ||||| ||| || || |||||||| ||| | || || || || Sbjct 764748 TTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTCTCAACCTCCAA 764807 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | || || | ||| | ||||| Sbjct 764808 TGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || ||||| || | ||||| |||| | || | || || Sbjct 765395 AGCACGAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAAAGGGTACGGCCGTCC 765454 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || |||||||| || || ||||| || ||||| || Sbjct 765455 TCAAGCTGTTTGCCGGCGAAGATCAGGCGTTGTTGATCAGGGGGAATGCCCTCCTTATCC 765514 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || || || || | ||||| ||| Sbjct 765515 TGAATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGACCTCAAGGGTGATGGTC 765574 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 765575 TTGCCAGT 765582 >seq13 Length=847613 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 149091 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 149032 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || || ||||| |||||||| |||||||| ||| || ||| Sbjct 149031 AGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 148972 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 148971 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 148913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530008214132