Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 8e-15 seq3 86.0 1e-11 >seq5 Length=3432170 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || || || ||| || ||||||||||| |||| | || | ||||| Sbjct 764637 GAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATC 764696 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || ||||| || || | |||||||| | | ||||||||||| || Sbjct 764697 TTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTATC 764756 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || ||||| | || | | |||| || ||||| || || | || || || Sbjct 764757 TTGAATCTTAGTCTTGACGTTATCAATGGTGTCGGAGCTCTCAACCTCCAATGTGATCGT 764816 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| | |||||| Sbjct 764817 CTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849 >seq3 Length=4187442 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 |||||||| ||||||| | || || || |||||||| ||| |||| || || ||| Sbjct 1408413 TTCTATGCTCTTTGGACCCCCGACCTATTCATGAAGCGTGTCGAGGCCAATGGTGATTGG 1408354 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | |||||| || || || ||||||||||| | | ||||| ||||| |||||||| Sbjct 1408353 ACCCTCTTCTGCCCTAACGAAGCCCCTGGCTTGGCAGATGTCTATGGCGACGAGTTTGAT 1408294 Query 115749 AATCTTTACGAA 115760 |||||||||| Sbjct 1408293 GCTCTTTACGAA 1408282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819646900338