Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 >seq1 Length=3223726 Score = 111 bits (122), Expect = 2e-19 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || |||||||| | ||||| ||| | || || | |||||||||| Sbjct 241632 GTGCTCTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCA 241573 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105 ||||| ||||| ||||||||||| | ||| | | ||| |||||| ||| | || | || Sbjct 241572 GCGAAGATGAGACGCTGCTGGTCCGGCGGGATACCCTCTTTGTCC-TGAATCTTGCTCTT 241514 Query 43106 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 || ||| | | | |||||| ||| || || | ||||| || || || || || | Sbjct 241513 GA-CGTTGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTAAGGG 241455 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| || ||||| ||||| Sbjct 241454 TCTTGACGAAGATCTGCAT 241436 Score = 102 bits (112), Expect = 9e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| ||||| ||| |||||| ||||| ||||| || | ||| || || | Sbjct 241195 ACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGACC 241136 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||| || || || || | ||||| ||||| | || | || ||||| Sbjct 241135 ATCCTCGAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGAGGAATGCCTTCCTT 241076 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | ||| ||||| || || || |||| ||||| Sbjct 241075 ATCCTGGATCTTCGACTTGACATTATCGATCGTATCGCTTGACTCAACTTCGAGGGTGAT 241016 Query 43148 GGTTTTGCCCGTTAGCGTCTTTAC 43171 ||| ||||| || || ||||| || Sbjct 241015 GGTCTTGCCAGTAAGGGTCTTGAC 240992 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 2289320 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2289379 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||| ||||| | || | | |||||||||| ||| || |||| ||| | Sbjct 2289380 TCAGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 2289438 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 2289439 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2289498 Query 43173 AA 43174 || Sbjct 2289499 AA 2289500 Score = 86.0 bits (94), Expect = 7e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || || ||||| |||||||| Sbjct 240878 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCGTCCTCAAGTTGCTTTCCAGCGAA 240819 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | ||||||||| ||| || |||| ||| Sbjct 240818 GATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCTTGGATCTTGCTCTTGA-CGT 240760 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||||||||| || || || | |||||||| ||||| || Sbjct 240759 TGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 240711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817063921000