Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4 217 1e-51 seq9 168 6e-37 seq1 95.1 1e-14 >seq4 Length=1687653 Score = 217 bits (240), Expect = 1e-51 Identities = 489/731 (67%), Gaps = 8/731 (1%) Strand=Plus/Plus Query 23250 ACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCA 23309 |||| | ||| | || ||||| || ||||||| ||| |||| ||| || | | Sbjct 1268993 ACTTCTCGTAGAGAGCCTCAAACTCTTCACCGTACACGTCTGCCAAGCCAGGAGCCTCGT 1269052 Query 23310 TCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTA 23369 | ||||| | |||| |||| || ||| || || |||| || | || || Sbjct 1269053 TAGGACAGAAGAGAGTCCAGTCGCCGTTGGATTCTACACGCTTCATGAACAAGTCGGGAG 1269112 Query 23370 TCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCA 23429 |||| | ||||||||||| || || || | |||||||| || ||| |||||| || Sbjct 1269113 TCCACAAGGCGTAGAACAGGTCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTGCGCA 1269172 Query 23430 AATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCG 23489 ||||| || || || ||||||| ||||| ||||| ||||| | |||||| || || | Sbjct 1269173 GGTCCAAGAATTCGAAGACGTCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAG 1269232 Query 23490 GTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCG 23549 | | ||| ||||| ||||| |||||||| | || |||||||||||||| | ||||| | Sbjct 1269233 GACGCTTGTTGCCTCCCTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATAG 1269292 Query 23550 GCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAACG 23608 | |||||||||||||| | ||| | ||||||| | || ||| | | || | | Sbjct 1269293 GGACGAGACCGTTGGAGGTACCG-TTGGTCCCGCCAATGTAGGAGCCTGTCGAACGGATG 1269351 Query 23609 TTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGA 23668 ||| |||| || ||| || || ||| | | ||| || ||||| || || |||| Sbjct 1269352 CGGTGGACGTTGAGACCAATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAAG 1269411 Query 23669 GTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATT 23728 ||||| ||||| || ||||||||||| | || | |||| | ||| ||||| | || Sbjct 1269412 GTGTCATAGATACCTTCGATGCTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAGC 1269471 Query 23729 TGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTC 23788 || | | || ||| | || |||||| || ||| || || || |||||| | Sbjct 1269472 TGGGGCTGCGGGGTACCAGCATTGAACAGGGTGGGGGATGCATGGGTGAAGTATTTCTGG 1269531 Query 23789 GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCG 23848 ||||| | | ||| || || || || || ||||| ||||| || || | || Sbjct 1269532 GACATCAAGTGGTATGTCTCAATTGCCCTCTCGATGTCACTACCGTGGATTCCAACAGCA 1269591 Query 23849 ACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGA 23905 || ||||||| || || ||||| | || | ||| | || | || | ||| Sbjct 1269592 ACCCGCATCAGCAGGTGCTGAGGACGCTCAGCAACCTT---TCCATCGATCCGCAGCAGG 1269648 Query 23906 TATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACT 23965 ||||| || | | || || || || || ||| |||||| || ||||| |||| ||| Sbjct 1269649 TATGACCGCTCAAGAGTCTTGAAACCGAAGAAGTTATAGTTGAAATCACGGTCGTACACG 1269708 Query 23966 ATGGCCGAATT 23976 || || || || Sbjct 1269709 ATAGCAGAGTT 1269719 >seq9 Length=1202464 Score = 168 bits (186), Expect = 6e-37 Identities = 235/325 (72%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||||||||| || ||||| ||||| || ||| || || | || || ||| || Sbjct 1006984 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATCTTCTGGCTG 1006925 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||| ||| |||| || || || ||| Sbjct 1006924 AAGAAGCGTGGCCTGATGCCTGGTCTTACATTCTCCAATGAGCTGATCTCTCGTGATGAG 1006865 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG--TCAATAAACCGACGC 58158 |||||||| || || ||||| ||| | ||| ||||||| ||| ||| ||||| Sbjct 1006864 GGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCAC-TTGAATCACCGCCCCGACAA 1006806 Query 58159 G-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 | ||||| || |||||| ||||| ||||| ||||| || ||| | ||||| | || Sbjct 1006805 GCAGATCG--TCCAGGACATCATCACTGAGGCTGTCGCTATTGAACAGGAGTTCTTGACT 1006748 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || || || || ||| ||||||| |||||| | | ||| | ||||||| || Sbjct 1006747 GACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGAA 1006688 Query 58278 TTTGTTGCCGACAGACTTTTGCTCG 58302 || ||||||||| | ||| || ||| Sbjct 1006687 TTCGTTGCCGACCGTCTTCTGGTCG 1006663 >seq1 Length=3223726 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| | || || ||| ||| Sbjct 241436 ATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCC 241495 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||| || || | ||||| |||||| Sbjct 241496 GACACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAG 241555 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||||||||||| ||| | |||||| ||| Sbjct 241556 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGCGCACTCTCTCCGATTACAAC 241615 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || ||||| ||| | || | ||||| Sbjct 241616 ATCCAGAAGGAGAGCACGCTCCACCTGGTCCTTCGTCTCCGTGGCGG 241662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765982094000