Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 1e-15 seq4 84.2 3e-11 >seq9 Length=1202464 Score = 98.7 bits (108), Expect = 1e-15 Identities = 325/500 (65%), Gaps = 9/500 (2%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 || ||||| ||||| ||||| || ||||| || || || || || |||| || || || Sbjct 1006551 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 1006610 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| || || || ||||| | | ||| ||| | |||||| | | Sbjct 1006611 TCCATGAAGTCGAAGGGGTTGGTGGCGTGGTAGTATTTCTGGTTGCCCAATGCGACCAGA 1006670 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | | || || |||||||| || || |||| | | ||||| || | || Sbjct 1006671 AGACGGTCGGCAACGAATTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGG 1006730 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 || || ||||| |||| | || || |||||||| | || || | || || || Sbjct 1006731 GCGACAGGGAGAGCGTCAGTCAAGAACTCCTGTTCAATAGCGACAGCCTCAGTGATGATG 1006790 Query 33531 AATCTAACGGTTT-CTTCACTCGGTGGATGTAAT--AAATGTTTAAACATCAAACATGCG 33587 ||| | | ||| |||| || || || || || |||| ||| || || Sbjct 1006791 TCCTGGACGATCTGCTTG--TCGG-GGCGGTGATTCAAGTGAGAGAACAGCAAGCAAGCA 1006847 Query 33588 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGC 33647 || ||| ||| |||||||| || | | || | || || || || || || || ||| Sbjct 1006848 AAGTCGGTGTGGAGACCCTCATCACGAGAGATCAGCTCATTGGAGAATGTAAGACCAGGC 1006907 Query 33648 ATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCT 33707 || ||||||||||| || ||||| || || || ||||| || ||||| |||||||| || Sbjct 1006908 ATCAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAACGAGCCGGAGAAGAAGATACCC 1006967 Query 33708 TCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCAC 33764 || || || || ||||| | || | | || | || | |||| || |||||| Sbjct 1006968 TCAACGGCGGCGAAGGCCACGAGACGCGAAGCAAAGGTGGACTCCTTGTCCTGAATCCAC 1007027 Query 33765 TTTTGAGCCCAATCGGCCTT 33784 || ||||||||| ||||| Sbjct 1007028 TTGATAGCCCAATCAGCCTT 1007047 >seq4 Length=1687653 Score = 84.2 bits (92), Expect = 3e-11 Identities = 200/302 (66%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093 |||| ||| | ||||| ||||| ||||||||||||| ||||||| || |||||||| Sbjct 1267795 TCCTGGTCGACGGTGAACTGAATTGGAGCGGATGCGGCCATCGTACGCAGGTAGTACATG 1267854 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62153 || || || | || | ||||||| ||| |||||||| || | ||| | Sbjct 1267855 CCGGTCTTCAATCCCATCTTCCATCCAGCAAAGTGCATACTGGTGATCTTGCCCATGGTG 1267914 Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213 || || || ||||| || | ||| || || |||||| |||| || | ||| ||| Sbjct 1267915 GGCTCCTTCATGTGGATGTTGAGAGACTGGGACTGGTCGATGTAGGCACCACGGTCGGCA 1267974 Query 62214 GCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62273 ||||| | | ||||| | || | ||| ||||| | || || || | ||| || Sbjct 1267975 GCCATCTGCAGGATCGACCGCTGGGAAATCTCCCACACGGTCTTGTACAGGGCCTTGATG 1268034 Query 62274 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTG 62330 || | || | ||| | | ||||| | ||| ||||| || | || || | ||||| Sbjct 1268035 TCGGCGGGGATGTTGGGGATGTTCTGGACGGAGCCACCCTCGGCGATGATACGGTTCTTC 1268094 Query 62331 AT 62332 || Sbjct 1268095 AT 1268096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817009546000