Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9 107 3e-18 seq4 93.3 6e-14 >seq9 Length=1202464 Score = 107 bits (118), Expect = 3e-18 Identities = 326/501 (65%), Gaps = 11/501 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| ||||| ||||| || ||||| || || ||||| || |||| || || || Sbjct 1006551 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 1006610 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| || || || ||||| | | || ||| | |||||| | | Sbjct 1006611 TCCATGAAGTCGAAGGGGTTGGTGGCGTGGTAGTATTTCTGGTTGCCCAATGCGACCAGA 1006670 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | | || || | |||||| || || |||| | | ||||| || | || Sbjct 1006671 AGACGGTCGGCAACGAATTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGG 1006730 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 || || ||||| |||| | || || |||||||||| ||| || || || || || Sbjct 1006731 GCGACAGGGAGAGCGTCAGTCAAGAACTCCTGTTCAATAGCGACAGCCTCAGTGATGATG 1006790 Query 42014 ----GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 | | ||| || | ||||| || ||| || |||| ||| || || Sbjct 1006791 TCCTGGACGATCTGCTTGTCGGGGCGGTG-ATTCAAG---TGAGAGAACAGCAAGCAAGC 1006846 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 || ||| ||| ||||||||||| | | || | || ||||| || || || || || Sbjct 1006847 AAAGTCGGTGTGGAGACCCTCATCACGAGAGATCAGCTCATTGGAGAATGTAAGACCAGG 1006906 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| ||||||||||| || ||||| || ||||| || || || || || |||||||| || Sbjct 1006907 CATCAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAACGAGCCGGAGAAGAAGATACC 1006966 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCA 42246 || || || || ||||| | || | | || | || | |||| || ||||| Sbjct 1006967 CTCAACGGCGGCGAAGGCCACGAGACGCGAAGCAAAGGTGGACTCCTTGTCCTGAATCCA 1007026 Query 42247 CTTTTGAGCCCAATCGGCCTT 42267 ||| ||||||||| ||||| Sbjct 1007027 CTTGATAGCCCAATCAGCCTT 1007047 >seq4 Length=1687653 Score = 93.3 bits (102), Expect = 6e-14 Identities = 195/290 (67%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || |||||||| |||| ||||||||| ||||||| || ||||||||| Sbjct 1267795 TCCTGGTCGACGGTGAACTGAATTGGAGCGGATGCGGCCATCGTACGCAGGTAGTACATG 1267854 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || | || | ||||||| ||| |||||||| || | ||| | | Sbjct 1267855 CCGGTCTTCAATCCCATCTTCCATCCAGCAAAGTGCATACTGGTGATCTTGCCCATGGTG 1267914 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || ||||| || || | ||||| || |||||| |||| || | ||| ||| Sbjct 1267915 GGCTCCTTCATGTGGATGTTGAGAGACTGGGACTGGTCGATGTAGGCACCACGGTCGGCA 1267974 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | | ||||| | || | ||| ||||| | || || || | ||| || Sbjct 1267975 GCCATCTGCAGGATCGACCGCTGGGAAATCTCCCACACGGTCTTGTACAGGGCCTTGATG 1268034 Query 71029 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075 || | || | ||| | | ||||| | ||| ||||| || || || || Sbjct 1268035 TCGGCGGGGATGTTGGGGATGTTCTGGACGGAGCCACCCTCGGCGATGAT 1268084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138570807000