Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq9 104 3e-17 seq4 87.8 2e-12 >seq9 Length=1202464 Score = 104 bits (114), Expect = 3e-17 Identities = 326/499 (65%), Gaps = 7/499 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| ||||| ||||| || ||||| || || || || || |||| || || || Sbjct 1006551 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 1006610 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || || ||||| | | || ||| | |||||| | | Sbjct 1006611 TCCATGAAGTCGAAGGGGTTGGTGGCGTGGTAGTATTTCTGGTTGCCCAATGCGACCAGA 1006670 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | || || |||||||| || || |||| | | ||||| || | || Sbjct 1006671 AGACGGTCGGCAACGAATTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGG 1006730 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 || || ||||| |||| | || || |||||||| | || || || || || || Sbjct 1006731 GCGACAGGGAGAGCGTCAGTCAAGAACTCCTGTTCAATAGCGACAGCCTCAGTGATGAT- 1006789 Query 33253 GATCTA-ACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | || ||| | | ||| | || || || || || |||| ||| || || | Sbjct 1006790 GTCCTGGACGATCTGCTTGTCGGGGCGG-TGATTCAAGTGAGAGAACAGCAAGCAAGCAA 1006848 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | ||| ||| |||||||| || | | || || || ||||| || || || || |||| Sbjct 1006849 AGTCGGTGTGGAGACCCTCATCACGAGAGATCAGCTCATTGGAGAATGTAAGACCAGGCA 1006908 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | ||||||||||| || ||||| || || || ||||| || || || |||||||| || | Sbjct 1006909 TCAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAACGAGCCGGAGAAGAAGATACCCT 1006968 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACT 33487 | || || || ||||| | || | | || | || | |||| || ||||||| Sbjct 1006969 CAACGGCGGCGAAGGCCACGAGACGCGAAGCAAAGGTGGACTCCTTGTCCTGAATCCACT 1007028 Query 33488 TTTGAGCCCAATCGGCCTT 33506 | ||||||||| ||||| Sbjct 1007029 TGATAGCCCAATCAGCCTT 1007047 >seq4 Length=1687653 Score = 87.8 bits (96), Expect = 2e-12 Identities = 201/302 (67%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | ||||| ||||| ||||||||||||| ||||||| || |||||||| Sbjct 1267795 TCCTGGTCGACGGTGAACTGAATTGGAGCGGATGCGGCCATCGTACGCAGGTAGTACATG 1267854 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102 || || || | || | ||||||| ||| |||||||| || | ||| | Sbjct 1267855 CCGGTCTTCAATCCCATCTTCCATCCAGCAAAGTGCATACTGGTGATCTTGCCCATGGTG 1267914 Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162 || || || ||||| || | ||| || || |||||| |||| || | ||| ||| Sbjct 1267915 GGCTCCTTCATGTGGATGTTGAGAGACTGGGACTGGTCGATGTAGGCACCACGGTCGGCA 1267974 Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222 ||||| | | ||||| | || | ||| ||||| | || || || | ||| || Sbjct 1267975 GCCATCTGCAGGATCGACCGCTGGGAAATCTCCCACACGGTCTTGTACAGGGCCTTGATG 1268034 Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279 || | || | ||| | | ||||| | ||| ||||| || || || || | ||||| Sbjct 1268035 TCGGCGGGGATGTTGGGGATGTTCTGGACGGAGCCACCCTCGGCGATGATACGGTTCTTC 1268094 Query 62280 AT 62281 || Sbjct 1268095 AT 1268096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946615987000