Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 140 8e-28 seq17 100 7e-16 seq9 86.0 1e-11 >seq1 Length=3223726 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| |||||| ||||| || ||||| | Sbjct 241434 CCACCACGGAGACGAAGGACAAGGTGAAGTGTGGATTCTTTCTGGATGTTGTAGTCCGAC 241375 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || || || ||||||||||| ||| Sbjct 241374 AGTGTACGACCATCCTCAAGCTGCTTTCCGGCAAAAATGAGACGCTGTTGGTCGGGAGGG 241315 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| ||||| || | ||| ||||| || || | || ||| || ||| Sbjct 241314 ATCCCTTCCTTATCTTGGATCTTTGATTTGACGTTATCGATCGTGTCCGACGACTCCACT 241255 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| |||||||| ||||| ||||| |||||||| Sbjct 241254 TCCAGAGTGATAGTCTTTCCGGTCAGGGTCTTAACGAAAATCTGCAT 241208 Score = 132 bits (146), Expect = 1e-25 Identities = 175/239 (73%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 288237 TCATACA-TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATAT 288295 |||| || | ||| || ||||| | ||| || || || | |||||| || || ||||| | Sbjct 241673 TCATTCAGTTTCCGCCACGGAGACGAAGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGT 241614 Query 288296 TATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTT 288355 | || |||| ||| ||||| || ||||| || || || || |||||||| |||||||| | Sbjct 241613 TGTAATCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCT 241554 Query 288356 GAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCG 288414 | ||||| || ||||| ||||| || || ||| || ||||| || || | ||| Sbjct 241553 GGTCCGGCGGGATACCCTCTTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATTGTGTCG 241495 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | ||||| ||||| || || || ||||||||||| |||||||| Sbjct 241494 GAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 241436 Score = 123 bits (136), Expect = 6e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| ||||| || || || || | ||| || || || ||| Sbjct 241170 TCCTTCTGAATGTTGTAGTCGGACAGCGTACGACCATCCTCGAGTTGCTTGCCGGCAAAG 241111 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||||||| | || || ||||| ||||||||||| |||| || || || Sbjct 241110 ATCAAACGCTGTTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTCGACTTGACATTA 241051 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||||| || || |||||||| ||||| ||||| || || || ||||||||| Sbjct 241050 TCGATCGTATCGCTTGACTCAACTTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACG 240991 Query 288463 A 288463 | Sbjct 240990 A 240990 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 2289322 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 2289381 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||||||||| ||||| || || || |||||||| || || || ||||| || Sbjct 2289382 AGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 2289441 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 2289442 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2289500 Score = 114 bits (126), Expect = 3e-20 Identities = 153/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || || || | || || || ||||| || |||| Sbjct 240917 CATG-CCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGT 240859 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || || || ||||| || | ||| ||||| ||||||||||||||||| || | Sbjct 240858 CGGAAAGGGTACGGCCGTCCTCAAGTTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCAG 240799 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420 |||||||| || || || ||||| || ||| || ||||| || || | |||||||| Sbjct 240798 GGGGGATTCCCTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCGCTCGAC 240740 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || || || || ||||| ||||| ||||| Sbjct 240739 TCGACCTCAAGAGTGATGGTCTTGCCGGT 240711 >seq17 Length=546789 Score = 100 bits (110), Expect = 7e-16 Identities = 259/387 (67%), Gaps = 12/387 (3%) Strand=Plus/Plus Query 325948 TCCCTTCCTGGCAACTACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAG 326007 |||||||| | | || || || ||||| || | ||||||| | ||||| | || Sbjct 189674 TCCCTTCCAGACCTTGACAATGGGAGTGATAAATTCAATCAAGAATTCCGGAATCTTCAG 189733 Query 326008 AAGATTAGGGAAACAGCTATG---GAAA-AAGTTCATGACGAGACCAGAAATGTGAGTTC 326063 | ||||||| || || ||| ||||| |||| ||||| |||||| ||| Sbjct 189734 CAAGCTAGGGAA----CTGTGCCTGAAGGAAGTTGATGAGCAGACCCTTGATGTGACTTC 189789 Query 326064 CGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTT 326123 | ||| |||| |||||||||||||||| |||||||||||||| | || || Sbjct 189790 CATCATGATCCTGATCGGTCATGATCATCAGGTGACCGTAACGAAGACTGCGGGTATCGG 189849 Query 326124 TGTACACTTTACCGGTTTGAAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTC 326182 ||||| | || | || ||||||| ||| || || | ||| |||||| ||||| Sbjct 189850 TGTACTCCTTCTTGTGCTGCAGGCCGATGAAGTTCTTGATGTTCTG-GATTTCCGCGTTC 189908 Query 326183 TTCGTGATGCTTG-CCACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAA 326241 |||| || || | | | |||||||| |||||||| | || |||||||| || ||||| Sbjct 189909 TTCGAAAT-CTGGTCGAACGATGCATCACGGACGTTGAGCAGCTTTCCACGCAGGGGGAA 189967 Query 326242 CACTCCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGA 326301 || || | || ||||||| |||| | || || || || | | || || Sbjct 189968 AACACCGAACAGATCCGGACCGACAACGGCACGTCCAGCCATGGCCAAACCCTTGGCTGA 190027 Query 326302 ATCCCCCTCCGTCAGAATGAGAGTGCA 326328 || || || || || ||||| ||||| Sbjct 190028 CTCACCTTCGGTAAGGATGAGCGTGCA 190054 >seq9 Length=1202464 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTT-CTATGATCGGTATGAATGCCGATCT 269171 ||| | |||||| | ||||||| |||| ||| | || |||| ||||| ||| | || Sbjct 1006765 GAACAGGAGTTCTTGACTGACGCTCTCCC-TGTCGCCCTGCTCGGCATGAACGCCAAGCT 1006707 Query 269172 CATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG--GCACTCGGTTATGAG 269229 ||||| || || ||||||||||| || || ||| |||| | ||| | || | || Sbjct 1006706 CATGACCCAGTACATCGAATTCGTTGCCGACCGT--CTTCTGGTCGCATTGGGCAACCAG 1006649 Query 269230 AAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAG 269289 ||| ||| | | | || ||||||| ||| ||||| || || | | || ||| Sbjct 1006648 AAATACTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCTGGCAAG 1006589 Query 269290 ACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATGA 269341 || ||||||||||| |||||||| | ||||| || ||||||| |||| Sbjct 1006588 ACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTCATGA 1006537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653266425850