Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq9 98.7 9e-16 >seq1 Length=3223726 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || ||||| || ||||| ||||| ||| | Sbjct 241206 CCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 241147 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| ||| ||| || || || || || || ||||||| ||||| || || ||||| Sbjct 241146 AGCGTACGACCATCCTCGAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGAGGA 241087 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||| ||| ||| ||| ||||| | |||| || || | ||| ||| Sbjct 241086 ATGCCTTCCTTATCCTGGATCTTCGACTTGACATTATCGATCGTATCGCTTGACTCAACT 241027 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || ||||| || || || || || Sbjct 241026 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 240992 Score = 95.1 bits (104), Expect = 1e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || |||||| ||||| Sbjct 2289322 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 2289381 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||| || || || || || |||||||||||| ||| || ||||| |||| || Sbjct 2289382 AGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TC 2289440 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | ||| || |||| ||| | || || || ||||| || || || || Sbjct 2289441 GATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2289500 Query 127105 A 127105 | Sbjct 2289501 A 2289501 Score = 82.4 bits (90), Expect = 7e-11 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| ||| | || || || || || || |||||| Sbjct 240883 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCGTCCTCAAGTTGCTTTCCA 240824 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || || ||||||||||| ||| || |||| Sbjct 240823 GCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCTTGGATCTTGCTCTTG 240764 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| |||||| | |||||| || | || | || |||||||| Sbjct 240763 ACGTTG-TCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 240711 >seq9 Length=1202464 Score = 98.7 bits (108), Expect = 9e-16 Identities = 284/433 (66%), Gaps = 7/433 (2%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || |||||| ||| ||||| |||||||||| ||| || || | || || | || Sbjct 1006984 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCGTTCGCCTCTATCTTCTGGCTG 1006925 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || || || ||| ||||| ||||| | || || Sbjct 1006924 AAGAAGCGTGGCCTGATGCCTGGTCTTACATTCTCCAATGAGCTGATCTCTCGTGATGAG 1006865 Query 47268 GGCCTGCACACCAACTTTGCCTGTCT-CTACTACAACACTAGAGTCGATCAAAAGTTGGA 47326 || || |||||| ||||||| || | || | |||| || |||| || Sbjct 1006864 GGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCACTTGA----ATCACCGCCCCGA 1006809 Query 47327 CGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGC 47386 | || | |||| ||||| | | || || ||||| ||||| |||||| || | Sbjct 1006808 CAAGCAGATCGTCCAGGACATCATCACTGAGGCTGTCGCTATTGAACAGGAGTTCTTGAC 1006749 Query 47387 CGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGA 47446 || ||||| || | | | | || |||||||| || | |||| |||||||||| Sbjct 1006748 TGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGA 1006689 Query 47447 ATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATT-TACCACACCGAGA 47505 ||| || |||||||| || || || | | | | || | || |||||| || | Sbjct 1006688 ATTCGTTGCCGACCGTCTTCTGGT-CGCATTGGGCAACCAGAAATACTACCACGCCACCA 1006630 Query 47506 ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGC 47565 | || ||||| || ||| | ||||| || | | |||||||||||||| |||||||||| Sbjct 1006629 ACCCCTTCGACTTCATGGAGAACATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAGC 1006570 Query 47566 GCGTCGGCGAATA 47578 | || || || || Sbjct 1006569 GTGTTGGTGACTA 1006557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500354218000