Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 107 8e-18 seq4 87.8 7e-12 >seq1 Length=3223726 Score = 107 bits (118), Expect = 8e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || ||||| || || ||||| ||||| || || || || || Sbjct 241208 ATGCAGATTTTCGTTAAGACCCTGACCGGAAAGACTATCACTCTGGAAGTGGAGTCGTCG 241267 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | ||| ||| || |||||||||||||| || ||||| || ||| Sbjct 241268 GACACGATCGATAACGTCAAATCAAAGATCCAAGATAAGGAAGGGATCCCTCCCGACCAA 241327 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | ||||| | || || || ||||| ||||| | || || |||| || || Sbjct 241328 CAGCGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACACTGTCGGACTACAAC 241387 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | || || | ||||||||| Sbjct 241388 ATCCAGAAAGAATCCACACTTCAC 241411 Score = 86.0 bits (94), Expect = 2e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119 |||| || || || ||||| || || || || || || ||||| ||| |||| || | Sbjct 240990 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAAGTTGAGTCAAGCGATACGATCG 241049 Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179 | | | || || || || ||||||||||| ||||||||||| ||||| ||||| | Sbjct 241050 ATAATGTCAAGTCGAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAACAGCGTTTGA 241109 Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239 | || | || || ||||| || ||||| | || || | || || || ||| | |||| Sbjct 241110 TCTTTGCCGGCAAGCAACTCGAGGATGGTCGTACGCTGTCCGACTACAACATTCAGAAGG 241169 Query 391240 ATGCAACACTTCACTTAGTATT 391261 | | || | ||||| || || Sbjct 241170 AGTCCACCTTGCACTTGGTGTT 241191 >seq4 Length=1687653 Score = 87.8 bits (96), Expect = 7e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 420807 AGTAAATACAACAGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAA 420866 |||||| || |||||||| | |||||| || | ||||| || || || ||||| || || Sbjct 1397546 AGTAAACACCACAGTTTTCGCAGGCATGTTCAGACCAATGGAGAACGTCTCAGTGGCGAA 1397487 Query 420867 CAAAACTTTAATTA-AtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAA 420925 ||||||||| || | | | ||| | |||||||||||| ||||||| | ||| |||| Sbjct 1397486 CAAAACTTTGATGAGACCCTCTTGGA-AAAGAATTTCAATGGTTTCTTTAAGAATCGGAA 1397428 Query 420926 TTATACCAGAATGATGA 420942 | ||| || |||||| Sbjct 1397427 GGAGACCGGAGTGATGA 1397411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716501458100