Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03-
01] 75 sequences; 28,005,201 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
seq9 84.2 2e-11
>seq1
Length=3223726
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||||| ||||| || | | | ||||| || ||||||||||||||| || ||
Sbjct 241201 ACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 241142
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||| ||||| || || |||| | |||| | ||||||||| || ||||| |||||
Sbjct 241141 ACGACCATCCTCGAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGAGGAATGCC 241082
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| || || || | | || | |||||| | | ||| |||||||
Sbjct 241081 TTCCTTATCCTGGATCTTCGACTTGACATTATCGATCGTATCGCTTGACTCAACTTCGAG 241022
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTT 132108
|| | || || ||||| || || ||
Sbjct 241021 GGTGATGGTCTTGCCAGTAAGGGTCTT 240995
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || ||||| ||| || ||||| || |||| |
Sbjct 241401 GATTCTTTCTGGATGTTGTAGTCCGACAGTGTACGACCATCCTCAAGCTGCTTTCCGGCA 241342
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || ||||||||||| || ||||| || ||||| ||||| || ||| ||| |
Sbjct 241341 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGATTTGACG 241282
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | || ||||||||| | || | || || || ||||| || ||
Sbjct 241281 TTATCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTCAGGGTCTTA 241222
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 241221 ACGAAAATCTGCAT 241208
>seq9
Length=1202464
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117
|| ||| ||||||| || |||| || || || |||||| |||| ||||||||||| ||
Sbjct 1006768 ATTGAACAGGAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAG 1006709
Query 47118 TCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGACAACC 47176
||| | | || || || || || || || ||||| |||| ||| | || |||||
Sbjct 1006708 CTCATGACCCAGTACATCGAATTCGTTGCCGACCGTCTTCTGGTCGCA--TTGGGCAACC 1006651
Query 47177 -GAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235
|||||| | | || || || || || || ||| | ||||| || | | ||||
Sbjct 1006650 AGAAATACTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCTGGCA 1006591
Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
| ||||| || |||||||| || || || || ||
Sbjct 1006590 AGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 1006557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610753177000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |