Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq9 84.2 2e-11 >seq1 Length=3223726 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| ||||| || | | | ||||| || ||||||||||||||| || || Sbjct 241201 ACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 241142 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| ||||| || || |||| | |||| | ||||||||| || ||||| ||||| Sbjct 241141 ACGACCATCCTCGAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGAGGAATGCC 241082 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| ||||| || || || | | || | |||||| | | ||| ||||||| Sbjct 241081 TTCCTTATCCTGGATCTTCGACTTGACATTATCGATCGTATCGCTTGACTCAACTTCGAG 241022 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTT 132108 || | || || ||||| || || || Sbjct 241021 GGTGATGGTCTTGCCAGTAAGGGTCTT 240995 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| || ||||| ||| || ||||| || |||| | Sbjct 241401 GATTCTTTCTGGATGTTGTAGTCCGACAGTGTACGACCATCCTCAAGCTGCTTTCCGGCA 241342 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||||||||| || ||||| || ||||| ||||| || ||| ||| | Sbjct 241341 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGATTTGACG 241282 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || ||||||||| | || | || || || ||||| || || Sbjct 241281 TTATCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTCAGGGTCTTA 241222 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 241221 ACGAAAATCTGCAT 241208 >seq9 Length=1202464 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117 || ||| ||||||| || |||| || || || |||||| |||| ||||||||||| || Sbjct 1006768 ATTGAACAGGAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAG 1006709 Query 47118 TCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGACAACC 47176 ||| | | || || || || || || || ||||| |||| ||| | || ||||| Sbjct 1006708 CTCATGACCCAGTACATCGAATTCGTTGCCGACCGTCTTCTGGTCGCA--TTGGGCAACC 1006651 Query 47177 -GAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235 |||||| | | || || || || || || ||| | ||||| || | | |||| Sbjct 1006650 AGAAATACTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCTTGGCTGGCA 1006591 Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||| || |||||||| || || || || || Sbjct 1006590 AGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 1006557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610753177000