Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 116 3e-21 seq1 93.3 4e-14 >seq4 Length=1687653 Score = 116 bits (128), Expect = 3e-21 Identities = 281/425 (66%), Gaps = 3/425 (1%) Strand=Plus/Plus Query 131609 TCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCC 131668 ||| | ||||| | || | ||| ||||||| ||| || |||||||| ||||| || Sbjct 1269049 TCGTTAGGACAGAAGAGAGTCCAGTCGCCGTTGGATTCTACACGCTTCATGAACAAGTCG 1269108 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728 || ||| || ||||| ||||| || | |||| | ||| || |||| | || Sbjct 1269109 GGAGTCCACAAGGCGTAGAACAGGTCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTG 1269168 Query 131729 ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788 || | || || || || | ||||| |||||||| || | || | || | || Sbjct 1269169 CGCAGGTCCAAGAATTCGAAGACGTCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCA 1269228 Query 131789 CCTTTGCGCTTACCGCCT---TGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845 || ||||| |||| || | || | | | | |||||||||| ||||| | | Sbjct 1269229 CCAGGACGCTTGTTGCCTCCCTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGC 1269288 Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905 || || | | |||||||| | | || ||||| | ||||||| ||| | | | | Sbjct 1269289 ATAGGGACGAGACCGTTGGAGGTACCGTTGGTCCCGCCAATGTAGGAGCCTGTCGAACGG 1269348 Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTT 131965 || ||| |||||||| |||||||| ||| || ||| ||||| | || || | | Sbjct 1269349 ATGCGGTGGACGTTGAGACCAATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTC 1269408 Query 131966 AGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGAC 132025 | |||| |||||||||||| | |||||| || |||||||| | ||||| |||| | Sbjct 1269409 AAGGTGTCATAGATACCTTCGATGCTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCC 1269468 Query 132026 AACTG 132030 | ||| Sbjct 1269469 AGCTG 1269473 >seq1 Length=3223726 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||||||| | |||| | || || ||||| ||||| ||| | || Sbjct 2289322 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 2289381 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 ||||||||||| ||||| || | |||||| || || ||||||| || | | | || Sbjct 2289382 AGACGCTGTTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 2289441 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | ||||| || || || || | || |||||||| || || || || Sbjct 2289442 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2289500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || |||||||| || | || | || || ||||| || ||| Sbjct 241404 GTGGATTCTTTCTGGATGTTGTAGTCCGACAGTGTACGACCATCCTCAAGCTGCTTTCCG 241345 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || |||||||||||||||| || || || | || || ||||| |||||| ||| Sbjct 241344 GCAAAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGATTTG 241285 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || ||||| ||||| |||| || || ||||| || Sbjct 241284 ACGTTATCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTCAGGGTC 241225 Query 27231 TTCACAAAGATTTGCATA 27248 || || || || |||||| Sbjct 241224 TTAACGAAAATCTGCATA 241207 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||| ||| | ||||| | ||||| | ||| ||||| ||| | Sbjct 241626 TCCTTCTGGATGTTGTAATCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAG 241567 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| || |||||||| | ||||||||| || |||||| | || | | | Sbjct 241566 ATGAGACGCTGCTGGTCCGGCGGGATACCCTCTTTGTCCTGAATCTTGCTCTTGACGTTG 241507 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | ||| ||||| | || || | || || || || || || || Sbjct 241506 TCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTAAGGGTCTTGACG 241447 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 241446 AAGATCTGCATA 241435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934011583400