Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 >seq1 Length=3223726 Score = 113 bits (124), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||| ||||| || ||||| || |||||||| ||||| || || || Sbjct 241208 ATGCAGATTTTCGTTAAGACCCTGACCGGAAAGACTATCACTCTGGAAGTGGAGTCGTCG 241267 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| ||| || || || ||||| | || || || ||| Sbjct 241268 GACACGATCGATAACGTCAAATCAAAGATCCAAGATAAGGAAGGGATCCCTCCCGACCAA 241327 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTACA 23788 |||||| | || |||||||| || || || || || | || |||| | | || |||| Sbjct 241328 CAGCGTCTCATTTTTGCCGGAAAGCAGCTTGAGGATGGTCGTACACTGTCG--GACTACA 241385 Query 23789 ACATACAAAAAGAGTCCACA 23808 |||| || ||||| |||||| Sbjct 241386 ACATCCAGAAAGAATCCACA 241405 Score = 93.3 bits (102), Expect = 3e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || ||||| || || || || ||||| ||||||||||| || | || || | | Sbjct 240990 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAAGTTGAGTCAAGCGATACGATCG 241049 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | ||| | || | || | | || || ||||| | || || || ||||||||||| Sbjct 241050 ATAATGTCAAGTCGAAGA-TCCAGGATAAGGAAGGCATTCCTCCTGACCAACAGCGTTTG 241108 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || ||||||||||| ||||| || || | || || | ||| |||||||| || || Sbjct 241109 ATCTTTGCCGGCAAGCAACTCGAGGATGGTCGTACGCTGTCCGACTACAACATTCAGAAG 241168 Query 23800 GAGTCCACATTACATTTAGTTTT 23822 |||||||| || || || || || Sbjct 241169 GAGTCCACCTTGCACTTGGTGTT 241191 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || ||||| || ||||| | ||||| || | Sbjct 241436 ATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCC 241495 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| |||||||| ||| | ||||| || || Sbjct 241496 GACACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAG 241555 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || ||||||| | |||||| | |||||||||| Sbjct 241556 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGCGCACTCTCTCCGATTACAAC 241615 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 241616 ATCCAGAAGGAG 241627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009291038100