Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq9 111 2e-19 seq4 111 2e-19 >seq9 Length=1202464 Score = 111 bits (122), Expect = 2e-19 Identities = 326/501 (65%), Gaps = 11/501 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||||| ||||| |||||||| || || || ||||| |||| || || || Sbjct 1006551 TTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATGTTC 1006610 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || || | | || ||| | || ||| | | Sbjct 1006611 TCCATGAAGTCGAAGGGGTTGGTGGCGTGGTAGTATTTCTGGTTGCCCAATGCGACCAGA 1006670 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | || ||||||||||| || ||| |||| | | ||||| || | || Sbjct 1006671 AGACGGTCGGCAACGAATTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGG 1006730 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 ||| || ||||| || || | ||||| |||||||||| |||||| || | || Sbjct 1006731 GCGACAGGGAGAGCGTCAGTCAAGAACTCCTGTTCAATAGCGACAGCCTCAGTGAT---- 1006786 Query 46579 GATGTT----ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634 ||||| || | | || || | || |||| || |||| || || || Sbjct 1006787 GATGTCCTGGACGATCTGCTTGTCGGGGCGGTGATTCAAGTGAGAGAACAGCAAGCAAGC 1006846 Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694 ||| || || || || ||||| | | || | || || || ||||| || ||||| Sbjct 1006847 AAAGTCGGTGTGGAGACCCTCATCACGAGAGATCAGCTCATTGGAGAATGTAAGACCAGG 1006906 Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754 ||| || |||||||| || ||||| || |||| ||||| || || || ||||| || || Sbjct 1006907 CATCAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAACGAGCCGGAGAAGAAGATACC 1006966 Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCA 46811 || || || ||||| || || || | | | | ||| || || | ||||||| Sbjct 1006967 CTCAACGGCGGCGAAGGCCACGAGACGCGAAGCAAAGGTGGACTCCTTGTCCTGAATCCA 1007026 Query 46812 CCTTTGAGCCCAATCAGCCTT 46832 | | ||||||||||||||| Sbjct 1007027 CTTGATAGCCCAATCAGCCTT 1007047 >seq4 Length=1687653 Score = 111 bits (122), Expect = 2e-19 Identities = 361/559 (65%), Gaps = 4/559 (1%) Strand=Plus/Plus Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || || ||||| || || || || || || | | |||| || || || || |||||||| Sbjct 1269193 TCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCTCCCTGG 1269252 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 || | ||||| |||||||| || || || | | ||| || | | ||||| || ||| Sbjct 1269253 TCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATAGGGACGAGACCGTTGGAGGTA 1269312 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 || || || || ||| || || | ||| || | || || || Sbjct 1269313 CCGTTGGTCCCGCCAATGTAGGAGCCTGTCGAACGGATGCGGTGGACGTTGAGACCAATA 1269372 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || |||| ||||| | ||||||| ||||| ||||||||||| || || || Sbjct 1269373 CCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAAGGTGTCATAGATACCTTCGATG 1269432 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 || || || |||||| | ||| || || | || || | || || || ||| Sbjct 1269433 CTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAGCTGGGGCTGCGGGGTACCAGCA 1269492 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 || |||| || || |||||||| ||||| |||| | || | | | |||||| ||| Sbjct 1269493 TTGAACAGGGTGGGGGATGCATGGGTGAAGTATTTCTGGGACATCAAGTGGTATGTCTCA 1269552 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 || | || || || | || ||||| ||||| || ||||||| || |||||| Sbjct 1269553 ATTGCCCTCTCGATGTCACTACCGTGGATTCCAACAGCAACCCGCATCAGCAGGTGCTGA 1269612 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || || || || ||| || || || || |||||| || | ||| || ||| Sbjct 1269613 GGACGCTCAGCAACCTTTCCATCGATCCGCAGCAGGTATGACCGCTCAAGAGTCTTGAAA 1269672 Query 77183 CCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCT 77240 || || |||| || ||||| || | ||||| | ||| | || || || | ||| Sbjct 1269673 CCGAAGAAGTTATAGTTGAAA--TCACGGTCGTACACGATAGCAGAGTTGAGCTCATCCG 1269730 Query 77241 TATATTTGGTAACAATATC 77259 || ||| ||||||| || Sbjct 1269731 CATGTTTCATAACAATCTC 1269749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933731624000