Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20chevalieri_20[genbank_20GCA_5F001599875.1_202016-03- 01] 75 sequences; 28,005,201 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 150 4e-31 >seq1 Length=3223726 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || ||||| || ||||| | || || ||||| || ||| Sbjct 241439 CAGATCTTCGTCAAGACCCTTACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCCGAC 241498 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||||||||||||||| || ||||| ||||||||||| Sbjct 241499 ACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAGCAG 241558 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||| | |||||||| | ||||| ||||||| ||| || Sbjct 241559 CGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGCGCACTCTCTCCGATTACAACATC 241618 Query 178104 CAAAAAGA 178111 || || || Sbjct 241619 CAGAAGGA 241626 Score = 113 bits (124), Expect = 1e-19 Identities = 139/189 (74%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || ||||| || ||||| || ||| ||||||||||| |||||||| Sbjct 240711 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGC---GACACCATCGACAACGTCAAG 240767 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| || ||||| || |||||||| || |||||||| || || |||||||| ||| Sbjct 240768 AGCAAGATCCAAGACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGA 240827 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || || || || || || | || ||| |||| || ||| |||| || || || || || Sbjct 240828 AAGCAACTTGAGGACGGCCGTACCCTTTCCGACTACAACATCCAGAAGGAGTCTACCCTC 240887 Query 178122 CATCTTGTT 178130 || || ||| Sbjct 240888 CACCTGGTT 240896 Score = 111 bits (122), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 2289501 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 2289445 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| |||||||| || || Sbjct 2289444 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAACAGCG 2289385 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 2289384 TCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 2289325 Query 178106 AAA 178108 || Sbjct 2289324 GAA 2289322 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/201 (72%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCA 177987 |||| || || || || || || || ||||||||||| || || |||| || || | Sbjct 240990 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAAGTTGAGTCAAGC---GATACGA 241046 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| || ||||| ||||| ||||| || ||||| || ||||| ||||| || || Sbjct 241047 TCGATAATGTCAAGTCGAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAACAGCGTT 241106 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | ||||| ||||| || || ||||| ||||| | || || |||| || ||| | || | Sbjct 241107 TGATCTTTGCCGGCAAGCAACTCGAGGATGGTCGTACGCTGTCCGACTACAACATTCAGA 241166 Query 178108 AAGAATCAACACTGCATCTTG 178128 | || || || |||| |||| Sbjct 241167 AGGAGTCCACCTTGCA-CTTG 241186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730043289550