Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4 116 4e-21 seq5 91.5 2e-13 >seq4 Length=3958284 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| ||||| ||| |||||| ||||| ||||| || | ||| || || | Sbjct 2111786 ACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGACC 2111727 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || | ||||| ||||| | || | || |||||| Sbjct 2111726 ATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCCTT 2111667 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| | | | |||||||| || || || |||| ||||| Sbjct 2111666 ATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGACTCAACCTCGAGGGTGAT 2111607 Query 43148 GGTTTTGCCCGTTAGCGTCTTTAC 43171 ||| ||||| || || ||||| || Sbjct 2111606 GGTCTTGCCAGTAAGGGTCTTGAC 2111583 Score = 102 bits (112), Expect = 9e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || | ||||| ||| | || || | |||||||||| Sbjct 2112223 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCA 2112164 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105 ||||| ||||| ||||| ||||| | ||| | | ||| |||||| ||| | || | || Sbjct 2112163 GCGAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCC-TGAATCTTGCTCTT 2112105 Query 43106 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 || ||| | | | |||||| ||| || || | ||||| || || || || || | Sbjct 2112104 GA-CGTTGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTGAGGG 2112046 Query 43165 TCTTTACAAAGATTTGCAT 43183 |||| || ||||| ||||| Sbjct 2112045 TCTTGACGAAGATCTGCAT 2112027 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||||| ||| | || || | ||||||||||||||| Sbjct 2111469 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAA 2111410 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||| ||||| | ||| | | ||||||||| ||| || |||| ||| Sbjct 2111409 GATGAGACGCTGTTGGTCCGGCGGGATTCCCTCCTTGTCTTGGATCTTGCTCTTGA-CGT 2111351 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | ||||||||||| || || || | |||||||| ||||| || Sbjct 2111350 TGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 2111302 >seq5 Length=1114898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 143179 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 143238 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||| ||||| | || | | |||||| ||| ||| || |||| ||| | Sbjct 143239 TCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTG 143297 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 143298 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 143357 Query 43173 AA 43174 || Sbjct 143358 AA 143359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817514227360