Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 223 3e-53 seq9 172 5e-38 seq4 86.0 6e-12 >seq8 Length=2117159 Score = 223 bits (246), Expect = 3e-53 Identities = 491/732 (67%), Gaps = 8/732 (1%) Strand=Plus/Minus Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGC 23308 ||||| | ||| | || ||||| || ||||||| |||||||| ||| || | | Sbjct 472467 TACTTCTCGTAGAGAGCCTCAAACTCTTCACCGTACACGTCGGCCAAGCCAGGAGCCTCG 472408 Query 23309 ATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGT 23368 | || || | |||| |||| || ||||| || |||| || | || || Sbjct 472407 CTAGGGCAGAAGAGAGTCCAGTCACCGTTGGACTCAACACGCTTCATGAACAAGTCGGGA 472348 Query 23369 ATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC 23428 |||| | ||||||||||| || || || | |||||||| || || |||||| | Sbjct 472347 GTCCACAAGGCGTAGAACAGGTCACGAGCTCTGACCTCCTCCTTACCATGGTTCTTGCGC 472288 Query 23429 AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCC 23488 | |||||| || || || ||||||| ||||| ||||| ||||| | |||||| || || Sbjct 472287 AGATCCAAGAACTCGAAGACGTCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCA 472228 Query 23489 GGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATC 23548 || | ||| ||||| ||||| |||||||| | || |||||||||||||| | ||||| Sbjct 472227 GGACGCTTGTTGCCTCCCTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATA 472168 Query 23549 GGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAAC 23607 || |||||||||||||| | ||| | |||||| | || ||| | | || | Sbjct 472167 GGGACGAGACCGTTGGAGGTACCG-TTGGTTCCGCCAATGTAGGAGCCTGTCGAACGGAT 472109 Query 23608 GTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667 | ||| |||| || ||| || || ||| | | ||| || ||||| || || ||||| Sbjct 472108 GCGGTGGACGTTGAGACCAATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAG 472049 Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 ||||| ||||| |||||||| ||||| | || | |||| | ||| ||||| | || Sbjct 472048 GGTGTCATAGATACCCTCGATACTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAA 471989 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 || | | || ||| | || |||||| || ||| || || || |||||| | Sbjct 471988 CTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTGGGGGATGCATGGGTGAAGTATTTCTG 471929 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 ||||| | | ||| || || || || |||||||| ||||| || || | || Sbjct 471928 GGACATCAAGTGGTATGTCTCAATTGCCCTCTCAATGTCACTACCGTGGATTCCAACAGC 471869 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAG 23904 || ||||||| || || ||||| | || | ||| | || | ||| | ||| Sbjct 471868 AACCCGCATCAGCAGGTGCTGAGGACGCTCAGCAACCTT---TCCATCGATTCGCAGCAG 471812 Query 23905 ATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCAC 23964 ||||| || | | || || || || || ||| ||||| || ||||| |||| ||| Sbjct 471811 GTATGACCGCTCAAGAGTCTTGAAACCGAAGAAGTTGTAGTTGAAATCACGGTCGTACAC 471752 Query 23965 TATGGCCGAATT 23976 || || || || Sbjct 471751 GATAGCAGAGTT 471740 >seq9 Length=3715394 Score = 172 bits (190), Expect = 5e-38 Identities = 294/419 (70%), Gaps = 12/419 (3%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||||||||| || ||||| ||||| || ||| || || | || || ||| || Sbjct 3488662 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGCTG 3488603 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||||||| |||| || || |||||| Sbjct 3488602 AAGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGTGACGAG 3488543 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG--TCAATAAACCGACGC 58158 |||||||| || || ||||| ||| | ||| ||||||| ||| || ||||| Sbjct 3488542 GGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCAC-TTGAACCACCGCCCCGACAA 3488484 Query 58159 G-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 | ||||| || |||||| ||||| ||||| ||||| || || | ||||| | || Sbjct 3488483 GCAGATCG--TCCAGGACATCATCACTGAGGCCGTCGCTATTGAGCAGGAGTTCTTGACT 3488426 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || || || || ||| ||||||| |||||| | | ||| | ||||||| ||| Sbjct 3488425 GACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGAG 3488366 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTAC-AACACG--AAA 58334 || ||||||||| | || || ||| | || || | | | ||| | |||| | Sbjct 3488365 TTCGTTGCCGACCGTCTCCTGGTCGCATTG---GGCAACCAGAAGTACTACCACGCCACC 3488309 Query 58335 AATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || || ||| | ||||| || | |||||||| ||||| ||||| || Sbjct 3488308 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAA 3488250 >seq4 Length=3958284 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| | || || ||| ||| Sbjct 2112027 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCC 2112086 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||| || || | ||||| ||||| Sbjct 2112087 GACACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAA 2112146 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || |||||||| || ||||||||||| Sbjct 2112147 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGA 2112181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766333135040