Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27]
12 sequences; 27,779,015 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq6 196 8e-46
seq11 174 2e-39
>seq6
Length=2970423
Score = 196 bits (216), Expect = 8e-46
Identities = 210/275 (76%), Gaps = 2/275 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||
Sbjct 2672150 CGCCAAGCGTCACCGCAAGATCT-TACGTGACAACATCCAGGGTATCACCAAGCCTGCTA 2672208
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| ||||| |||||||| ||||||||| |||| | || |||| ||||| |
Sbjct 2672209 TCCGGCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAAA 2672268
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | |||| ||||||| | ||||||||| ||| || || ||| ||||
Sbjct 2672269 CCCGTGGTGTCCTCAAGACCTTCCTCGAATCCGTTATCCGTGACGCCGTCACCTACACCG 2672328
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || || ||||| |||||||| |||| ||||||| || | || || || |
Sbjct 2672329 AACACGCCAAGCGCAAGACCGTCACCTCGCTGGACGTCGTCTACGCCCTCAAGCGCCAGG 2672388
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
|||||| | || ||||| || ||||| || ||
Sbjct 2672389 GCCGTACCCTGTACGGTTTCGGTGGTTAAGCTGCT 2672423
>seq11
Length=3207021
Score = 174 bits (192), Expect = 2e-39
Identities = 201/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||||
Sbjct 1049029 GCCAAGCGTCACCGCAAGATCT-TACGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 1048971
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 1048970 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 1048911
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| |||| | |||| ||||||| || || |||| |||||| || || || ||
Sbjct 1048910 CCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACATACACTGA 1048851
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| ||||| || | || | ||||| || | || || || ||
Sbjct 1048850 GCACGCCAAGAGAAAGACCGTCACGTCGCTCGACGTTGTCTACGCCCTCAAGCGCCAGGG 1048791
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| | | || ||||| || |||||
Sbjct 1048790 CCGTACGCTCTACGGTTTCGGTGGTTAA 1048763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075189028316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |