Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27]
12 sequences; 27,779,015 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 114 1e-20
>seq4
Length=3958284
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || | ||||| | ||||||||||||||
Sbjct 2111799 ATGCAGATTTTCGTTAAGACCCTAACCGGAAAGACTATCACTCTGGAAGTGGAGTCGTCG 2111858
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| ||| ||| || || |||||||| || || ||||||
Sbjct 2111859 GACACGATCGACAACGTCAAGTCAAAGATCCAAGATAAGGAAGGGATCCCTCCCGACCAA 2111918
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| ||||| || || | || |||| ||| || || || |||||
Sbjct 2111919 CAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCCTGTCGGACTACAAC 2111978
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || ||||||||||| || ||
Sbjct 2111979 ATCCAGAAAGAATCCACTCTTCA 2112001
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| | || || || ||||||| |||| || ||||| ||||| |||||
Sbjct 2111583 GTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGAT 2111642
Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130
| ||| || ||| || || || || ||||| |||||||||||||| | ||
Sbjct 2111643 AATGTCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAACAGCGTTTGATC 2111702
Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190
|| |||||||| || | || |||| ||| || || ||| ||||| ||||| || ||
Sbjct 2111703 TTCGCCGGCAAGCAGCTCGAGGATGGTCGTACGCTGTCCGACTACAACATTCAGAAGGAG 2111762
Query 25191 TCCACGCTACATTTAGTG 25208
||||| | || || |||
Sbjct 2111763 TCCACCTTGCACTTGGTG 2111780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327936625780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |