Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3 125 1e-23 seq9 113 9e-20 seq4 87.8 4e-12 >seq3 Length=2614642 Score = 125 bits (138), Expect = 1e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || ||||||| ||||| |||| ||| Sbjct 2429063 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 2429122 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || |||||| ||||||||||| | || || ||||| |||||||||| || | Sbjct 2429123 CAGACTCGCCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTGCTCGGTCCCAACGGTACC 2429182 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 2429183 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 2429242 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 || || | ||| ||||| || ||||||||| ||||| || Sbjct 2429243 GACGAAGTCAAGACCGTGTACGTCGAGCACGACCTCGACGCC 2429284 >seq9 Length=3715394 Score = 113 bits (124), Expect = 9e-20 Identities = 273/405 (67%), Gaps = 14/405 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 3488253 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 3488312 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || | ||| | ||| | | ||| | ||| || | || ||||| || || ||||| | Sbjct 3488313 GCGTGGTAGTACTTCTGGTTGCCCAATGCGACCAGGAGACGGTCGGCAACGAACTCGATG 3488372 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||| ||| || | | ||||||||| | || |||| ||| | || ||| | Sbjct 3488373 TACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGGGCGAC-AGGGAGAGCGTCAGTCAA 3488431 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC---CTG--TGCCAGA 251796 ||| |||| || | || || ||||| | || ||| || ||| || | | Sbjct 3488432 GAACTCCTGCTCAATAGCGACGGCCTCAGTGATGATGTCCTGGACGATCTGCTTGTCGGG 3488491 Query 251797 GACAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCTC 251855 | | | ||| || | ||| |||| ||| | |||| | ||| |||||||| Sbjct 3488492 G--CGGTGGTT---CAAGTGAGAGAACAGCAAGCAAG-CAAAGTCGGTGTGGAGACCCTC 3488545 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| ||| ||| | ||||||||| | || |||||||||| ||||| ||| | || Sbjct 3488546 GTCACGAGAGATCAGCTCGTTGGAGAAGGTAAGACCAGGCATCAGGCCACGCTTCTTCAG 3488605 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 ||||||||| | | || || |||||||| | | |||||| || Sbjct 3488606 CCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATACCCTCAAC 3488650 >seq4 Length=3958284 Score = 87.8 bits (96), Expect = 4e-12 Identities = 227/341 (67%), Gaps = 10/341 (3%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||| ||| ||||||| | | |||| || || | | | | ||||| || Sbjct 204772 GATGAGCGTAAGGAATGGCTGCGCCAATTCCGTCCGGGTACCTACCTTGACCACTCCGTC 204713 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| ||| || | | ||||||||| |||||||| | ||||| ||| | |||| | Sbjct 204712 GCCAAGATCACCTACACGGACTTCATCAACAAGGAGTTGATTCTGTTCAGTATGGCGG-A 204654 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 | | | || || || ||| || |||||||| || ||||| ||||||||| | Sbjct 204653 TAACATT---CGGTCCATCCCCTCGGTTGTGGATGGTCTGAAGCCCGGTCAGCGTAAGGT 204597 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 ||| | | || ||| ||| ||||| | || || ||||||| | || |||| Sbjct 204596 CCTGTATACCTGTTTCCGGCGCAACCTTAAGAAGGATATGAAGGTCGTCGAATTGGCTGG 204537 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGA-GCAGAGTCTGCAGGGTGCCATTG 218734 | | || || | || | | ||||||||||||||| || | ||||| | |||| Sbjct 204536 TCACGTTTCGGGTATGACCGCCTACCATCACGGTGATGCCTCAT-TGCAGCAGACGATTG 204478 Query 218735 TAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 | ||| | || ||||||| ||| || |||||||| ||| Sbjct 204477 TCGGCCTTGCCCAGGACTTTGTCGGTTCGAACAACATCAAC 204437 Score = 87.8 bits (96), Expect = 4e-12 Identities = 114/156 (73%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 217812 GGCTGGCACCAAAAACTCTGGTCTCTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGC 217871 ||| |||||||| || | || |||||| |||||||| || || || || ||||| | Sbjct 205418 GGCCGGCACCAAGGACGGTCATCACTGCACGCTCATCCTTACCGAAGGCGAGTCAGC--C 205361 Query 217872 CACGCT--GGCAACCGCTGGTCTTGCCGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCC 217929 | | | ||| | ||||| | |||||| || |||| || || ||| | |||||| Sbjct 205360 AAGGGTTTGGCCATGGCTGGACGTGCCGTTGTCGGTCCGGATCTGTTCGGTGTTTTCCCC 205301 Query 217930 CTCCGTGGTAAGCTGCTCAACGTGCGCGATGCCTCG 217965 || ||||| |||||||||||||| || ||||| ||| Sbjct 205300 CTGCGTGGAAAGCTGCTCAACGTCCGTGATGCATCG 205265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836641970092