Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 seq5 91.5 1e-13 >seq4 Length=3958284 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| || || || | || || || || ||||||||||| ||| Sbjct 2111800 ATACCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCG 2111741 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||| || || || || || ||| |||| | |||||||||||| ||| Sbjct 2111740 GACAGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGA 2111681 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || ||||| || | | || | ||||||| |||| || Sbjct 2111680 GGAATGCCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGACTCA 2111621 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || ||||| || || || || || Sbjct 2111620 ACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 2111583 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || |||||||| || |||||||| || Sbjct 2112028 ATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCC 2111969 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||| ||||| || || || ||| | ||||||||||||||||| ||| Sbjct 2111968 GACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGA 2111909 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || |||||| || | | || | ||||| | || || Sbjct 2111908 GGGATCCCTTCCTTATCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCCGACGACTCC 2111849 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| || || || || ||||||||||| Sbjct 2111848 ACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2111799 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || || |||||||| ||| | ||| || |||||| | || ||||||||| || Sbjct 2112217 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAG 2112158 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 |||||||||||||||||||| || || || |||||||| |||||| || | | Sbjct 2112157 ATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCCTGAATCTTGCTCTTGACGTTG 2112098 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||||||| |||||| |||| || | || || || || || || || || Sbjct 2112097 TCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGACG 2112038 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 2112037 AAGATCTGCAT 2112027 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | || | ||||| || || || |||||||| ||| Sbjct 2111507 ATGCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 2111448 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| | || ||||||||| |||||||||||||||||||||| Sbjct 2111447 GAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGC 2111388 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | || | ||||||| | || ||| Sbjct 2111387 GGGATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCG 2111328 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | || | || |||||||| Sbjct 2111327 ACCTCAAGAGTGATGGTCTTGCCGGT 2111302 >seq5 Length=1114898 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || || |||||||| ||||||| || || ||| ||||| || ||||||||| |||| Sbjct 143181 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 143240 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 || |||||||||||||| || || || || || || ||||| || | | || Sbjct 143241 AGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 143300 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | ||||||| | || || ||||| | ||| | || || || ||||| || || || ||| Sbjct 143301 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 143360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134338555344