Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4 141 2e-28 seq5 120 7e-22 >seq4 Length=3958284 Score = 141 bits (156), Expect = 2e-28 Identities = 177/239 (74%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 288237 TCATACA-TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATAT 288295 |||| || | ||| || ||||| | ||| || || || | |||||| || || ||||| | Sbjct 2112264 TCATTCAGTTTCCGCCACGGAGACGAAGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGT 2112205 Query 288296 TATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTT 288355 | ||||||| ||| ||||| || ||||| || || || || |||||||| |||||||||| Sbjct 2112204 TGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTT 2112145 Query 288356 GAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCG 288414 | ||||| || ||||| ||||| || || ||| || ||||| || || | ||| Sbjct 2112144 GGTCCGGCGGGATACCCTCTTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATTGTGTCG 2112086 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | ||||| ||||| || || || ||||||||||| |||||||| Sbjct 2112085 GAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 2112027 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| |||||| ||||| || ||||| | Sbjct 2112025 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCCGAC 2111966 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| ||||| || ||||||||||| ||| Sbjct 2111965 AGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGG 2111906 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| ||||| || | || ||||| || || | || ||| || ||| Sbjct 2111905 ATCCCTTCCTTATCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCCGACGACTCCACT 2111846 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 2111845 TCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2111799 Score = 114 bits (126), Expect = 3e-20 Identities = 153/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || || || | || || || ||||| || |||| Sbjct 2111508 CATG-CCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGT 2111450 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| ||||| || ||||| || || || || |||||||| ||||||||||| Sbjct 2111449 CGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCG 2111390 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420 |||||||| || || || ||||| || ||| || ||||| || || | |||||||| Sbjct 2111389 GCGGGATTCCCTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCGCTCGAC 2111331 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 || || || || ||||| ||||| ||||| Sbjct 2111330 TCGACCTCAAGAGTGATGGTCTTGCCGGT 2111302 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| ||||| || || || || | || || || |||||| Sbjct 2111761 TCCTTCTGAATGTTGTAGTCGGACAGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAG 2111702 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||||||| | || || || || ||||||||||| |||| || || || Sbjct 2111701 ATCAAACGCTGTTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTGACATTA 2111642 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| || || || ||||| ||||| ||||| || || || ||||||||| Sbjct 2111641 TCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACG 2111582 Query 288463 A 288463 | Sbjct 2111581 A 2111581 Score = 100 bits (110), Expect = 7e-16 Identities = 259/387 (67%), Gaps = 12/387 (3%) Strand=Plus/Plus Query 325948 TCCCTTCCTGGCAACTACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAG 326007 |||||||| | | || || || ||||| || | ||||||| | ||||| | || Sbjct 205013 TCCCTTCCAGACCTTGACAATGGGAGTGATAAATTCAATCAAGAATTCCGGAATCTTCAG 205072 Query 326008 AAGATTAGGGAAACAGCTATG---GAAA-AAGTTCATGACGAGACCAGAAATGTGAGTTC 326063 | ||||||| || || ||| ||||| |||| ||||| |||||| ||| Sbjct 205073 CAAGCTAGGGAA----CTGTGCCTGAAGGAAGTTGATGAGCAGACCCTTGATGTGACTTC 205128 Query 326064 CGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTT 326123 | ||| |||| |||||||||||||||| |||||||||||||| | || || Sbjct 205129 CATCATGATCCTGATCGGTCATGATCATCAGGTGACCGTAACGAAGACTGCGGGTATCGG 205188 Query 326124 TGTACACTTTACCGGTTTGAAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTC 326182 ||||| | || | || ||||||| ||| || || | ||| |||||| ||||| Sbjct 205189 TGTACTCCTTCTTGTGCTGCAGGCCGATGAAGTTCTTGATGTTCTG-GATTTCCGCGTTC 205247 Query 326183 TTCGTGATGCTTG-CCACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAA 326241 |||| || || | | | |||||||| |||||||| | || |||||||| || ||||| Sbjct 205248 TTCGAAAT-CTGGTCGAACGATGCATCACGGACGTTGAGCAGCTTTCCACGCAGGGGGAA 205306 Query 326242 CACTCCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGA 326301 || || | || ||||||| |||| | || || || || | | || || Sbjct 205307 AACACCGAACAGATCCGGACCGACAACGGCACGTCCAGCCATGGCCAAACCCTTGGCTGA 205366 Query 326302 ATCCCCCTCCGTCAGAATGAGAGTGCA 326328 || || || || || ||||| ||||| Sbjct 205367 CTCGCCTTCGGTAAGGATGAGCGTGCA 205393 >seq5 Length=1114898 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 143181 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 143240 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || |||||||| ||||| || || ||||||||||| || || || ||||| || Sbjct 143241 AGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 143300 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 143301 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 143359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654218628136