Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 8e-15 seq3 95.1 3e-14 seq9 91.5 3e-13 >seq4 Length=3958284 Score = 96.9 bits (106), Expect = 8e-15 Identities = 258/387 (67%), Gaps = 12/387 (3%) Strand=Plus/Plus Query 298069 TCCCTTCCTGGCAACTACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAG 298128 |||||||| | | || || || ||||| || | ||||||| | ||||| | || Sbjct 205013 TCCCTTCCAGACCTTGACAATGGGAGTGATAAATTCAATCAAGAATTCCGGAATCTTCAG 205072 Query 298129 AAGATTAGGGAAACAGCTATG---GAAA-AAGTTCATGACGAGACCAGAAATGTGAGTTC 298184 | ||||||| || || ||| ||||| |||| ||||| |||||| ||| Sbjct 205073 CAAGCTAGGGAA----CTGTGCCTGAAGGAAGTTGATGAGCAGACCCTTGATGTGACTTC 205128 Query 298185 CGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTT 298244 | ||| |||| |||||||||||||||| |||||||||||||| | || || Sbjct 205129 CATCATGATCCTGATCGGTCATGATCATCAGGTGACCGTAACGAAGACTGCGGGTATCGG 205188 Query 298245 TGTACACTTTACCGGTTTGAAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTC 298303 ||||| | || | || ||||||| ||| || || | ||| |||||| ||||| Sbjct 205189 TGTACTCCTTCTTGTGCTGCAGGCCGATGAAGTTCTTGATGTTCTG-GATTTCCGCGTTC 205247 Query 298304 TTCGTGATGCTTG-CCACGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAA 298362 |||| || || | | | |||||||| ||||| || | || |||||||| || ||||| Sbjct 205248 TTCGAAAT-CTGGTCGAACGATGCATCACGGACGTTGAGCAGCTTTCCACGCAGGGGGAA 205306 Query 298363 CACTCCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGA 298422 || || | || ||||||| |||| | || || || || | | || || Sbjct 205307 AACACCGAACAGATCCGGACCGACAACGGCACGTCCAGCCATGGCCAAACCCTTGGCTGA 205366 Query 298423 ATCCCCCTCCGTCAGAATGAGAGTGCA 298449 || || || || || ||||| ||||| Sbjct 205367 CTCGCCTTCGGTAAGGATGAGCGTGCA 205393 >seq3 Length=2614642 Score = 95.1 bits (104), Expect = 3e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 334135 CGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAA 334194 ||||||| ||||| || ||||| | || || | | ||| |||||| || |||| Sbjct 2429282 CGTCGAGGTCGTGCTCGACGTACACGGTCTTGACTTCGTCCTTCTTGGGGAAACCCTCAA 2429223 Query 334195 GCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACA 334254 |||| |||| || || ||||| || || | ||||| | ||||| || || || Sbjct 2429222 GCTGCTCGTTGTTGATGGCACGCATGAGGGTGGTCTTACCGGTACCGTTGGGACCGAGCA 2429163 Query 334255 GACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCAC 334314 |||||||||| | |||||||| ||| || || || | |||||| | || || ||| Sbjct 2429162 GACCGTAGCGCTGGCCACGCTTGAGACGGAGGCGAGTCTGGTTCAGCAAGATCTTGGCAC 2429103 Query 334315 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||| ||||| || || || | |||||||||||||| Sbjct 2429102 CATAGGCCAGGGAGAAAGTGCAGTTGCACAGATCCTCACC 2429063 >seq9 Length=3715394 Score = 91.5 bits (100), Expect = 3e-13 Identities = 174/254 (69%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | || |||| ||| | |||||| | || || || Sbjct 3488467 ATCATCACTGAGGCCGTCGCTATTGAGCAGGAGTTCTTGACTGACGCTCTCCC-TGTCGC 3488409 Query 243562 CTTATT-GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 | | | ||||||||| | | |||||| ||||||||||| ||||| |||||||| | Sbjct 3488408 CCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGAGTTCGTTGCCGACCGTCT 3488349 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | |||| | || | |||| ||| || ||| |||||||| | ||| ||||| Sbjct 3488348 CCTGGTCGCATTGGGCAACCAGAAGTACTACCACGCCACCAACCCCTTCGACTTCATGGA 3488289 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740 | ||| || || || || || ||||||||||| |||||||| |||| || || Sbjct 3488288 GAACATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAA 3488229 Query 243741 CCCTGGTGTGATGA 243754 ||||||| |||| Sbjct 3488228 GGCTGGTGTCATGA 3488215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879830432200