Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9 176 4e-39 seq4 109 5e-19 seq5 95.1 1e-14 >seq9 Length=3715394 Score = 176 bits (194), Expect = 4e-39 Identities = 346/505 (69%), Gaps = 25/505 (5%) Strand=Plus/Minus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGGCCGAGCGC 52400 |||||| | ||||| || ||||||||| || |||| | |||| | || ||| Sbjct 3488725 AAGGCTGATTGGGCTATCAAGTGGATCCAG---GACAAGGAGTCCACCTTTGCTTCGCGT 3488669 Query 52401 ATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTT 52460 | |||||||||||| || ||||| | || || || ||| || ||| | ||||| Sbjct 3488668 CTCGTGGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTC 3488609 Query 52461 TACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGC 52520 | | || | | ||| | ||||| || || || ||| ||||||| |||| || || Sbjct 3488608 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGT 3488549 Query 52521 GACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACT---ACAAGACGCGCGTGACC 52574 ||||| || || ||||| |||||||| ||| || | || || || | | || Sbjct 3488548 GACGAGGGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCACTTGAACCACCGCCCC 3488489 Query 52575 GAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAG 52634 || || | ||| || || ||| ||| ||||| || ||||| || || Sbjct 3488488 GACAAGCAGA--TCGTCCAGGA-------CATCATCACTGAGGCCGTCGCTATTGAGCAG 3488438 Query 52635 GAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGC 52694 ||||| || || | ||| || || |||| ||||| ||||||||||| || |||| | Sbjct 3488437 GAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACC 3488378 Query 52695 GAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGGCAGCCA-AAGTACT 52752 ||||||||||||| || || || ||||| |||| ||| | ||||| ||| ||||||| Sbjct 3488377 CAGTACATCGAGTTCGTTGCCGACCGTCTCCTGGTCGCA--TTGGGCAACCAGAAGTACT 3488320 Query 52753 TCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACT 52812 | |||| ||| || || || || ||| | ||||| || || | ||||||||||||| Sbjct 3488319 ACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAACT 3488260 Query 52813 TTTTCGAGAAGCGAGTCGGCGAGTA 52837 | ||||||||||| || || || || Sbjct 3488259 TCTTCGAGAAGCGTGTTGGTGACTA 3488235 >seq4 Length=3958284 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | | |||||||| ||||||||||||||| | Sbjct 2111797 CCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 2111738 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||||| || || |||| |||| | |||||||||||| ||||| Sbjct 2111737 AGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGA 2111678 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || || || ||| || || | | || | ||||||| | ||||| ||| Sbjct 2111677 ATGCCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGACTCAACC 2111618 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| || | || || ||||| || || || || Sbjct 2111617 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 2111583 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || ||||||||||| || ||||| ||||| || || || |||| Sbjct 2111992 GATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCG 2111933 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||||||||| ||||| || ||||| || || ||| ||| || | Sbjct 2111932 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGACTTGACG 2111873 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||||||| || | || | || || || || || || || Sbjct 2111872 TTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTA 2111813 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 2111812 ACGAAAATCTGCAT 2111799 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | | |||||||| || |||||||||||| Sbjct 2111505 GCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 2111446 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| ||| || || | || ||||| | |||| ||||||||||||||||| || Sbjct 2111445 GAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGG 2111386 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||||| ||||||| || Sbjct 2111385 GATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGAC 2111326 Query 138567 CTC 138569 ||| Sbjct 2111325 CTC 2111323 >seq5 Length=1114898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 143179 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 143238 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | || |||||||||||||| || ||||| || || || ||| || || | | | Sbjct 143239 TCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 143298 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 143299 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 143358 Query 138605 AA 138606 || Sbjct 143359 AA 143360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262325560640