Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 150 3e-31 seq9 129 1e-24 >seq8 Length=2117159 Score = 150 bits (166), Expect = 3e-31 Identities = 377/562 (67%), Gaps = 18/562 (3%) Strand=Plus/Minus Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GG 222000 ||| ||||| | |||||| |||||||||| | ||| ||| ||| ||| ||| || || Sbjct 472459 GTAGAGAGCCT--CAAACTCTTCACCGTACACGTCGGCCAAGCCAGGAG-CCTCGCTAGG 472403 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 || | ||| |||||| |||| | || | || |||||| | ||| || |||| Sbjct 472402 GCAGAAGAGAGTCCAGTCACCGTTGGACTCAACACGCTTCATGAACAAGTCGGGAGTCCA 472343 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || || | || || || | | | ||| ||||||| || | ||| || | |||| Sbjct 472342 CAAGGCGTAGAACAGGTCACGAG--CTCTGACCTCCTCCTTACCATGGTTCTTGCGCAGA 472285 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 ||||| ||||| || | ||| | |||||| ||||| || |||| ||| | ||| || || Sbjct 472284 TCCAAGAACTCGAAGACGTCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCAGGA 472225 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGG 222237 ||||||||||| ||||| || || || ||| | |||| | | ||| || | || Sbjct 472224 CGCTTGTTGCCTCCCTGGTCGACGTATCT-AGCAGTGTTGTTGTACACGCGGAGCATAGG 472166 Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297 || || |||||||| ||||||||| || |||||| | ||| | | || | Sbjct 472165 GACGAGACCGTTGGAGGTACCGTTGGTTCCGCCAATGTAGG---AGCCTGTCGAACGGAT 472109 Query 222298 ACTGGCAGAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 | || ||| | || |||||||||||| ||| |||||||| || ||| |||| | Sbjct 472108 GC-GGTGGACGTTGAGACCAATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCA 472050 Query 222354 GAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACA 222413 | ||||| ||| ||||| ||| ||| |||| | || | || || || || | || Sbjct 472049 GGGTGTCATAGATACCCTCGATACTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCA 471990 Query 222414 TCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 ||| | | | || || ||||| ||||| ||||| || || || ||||| | Sbjct 471989 ACTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTGGGGGATGCATGGGTGAAGTATTTCT 471930 Query 222474 TAGACATCAGATCGTACGTCTC 222495 ||||||| | ||| ||||| Sbjct 471929 GGGACATCAAGTGGTATGTCTC 471908 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||||| | | ||| | ||| || ||| | || Sbjct 473314 GTTGACAACCTGGAACTCACCGGCCAGCACACGACGGGAGTAGATGTTCGAGGTGTAGGG 473255 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||| |||||| |||||| || ||||| |||||||| |||||||| Sbjct 473254 CTCGAAGCACTCGTTGAAGCCCAGAATCTGACTGGTACTGGCAGTGGGCATAGGTGCCAC 473195 Query 221236 CAGCAGACTGTTGCG 221250 ||||||||||||||| Sbjct 473194 CAGCAGACTGTTGCG 473180 >seq9 Length=3715394 Score = 129 bits (142), Expect = 1e-24 Identities = 323/492 (66%), Gaps = 11/492 (2%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| || ||||||||| | | || | || |||| ||| || || ||||| Sbjct 3488716 TGGGCTATCAAGTGGATCCAGGACAAGGAGTCCACCTTTGCTTCGCGTCTCGTGGCCTTC 3488657 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || || ||||| ||||| ||| || ||||| || | ||||||||||| ||| || Sbjct 3488656 GCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGCTGAAGAAG 3488597 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||| || || ||| ||||||||||| ||| | |||||||||||| Sbjct 3488596 CGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTC 3488537 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG-A 26072 |||| || ||||| ||| |||| | | | |||||| |||| || |||| | Sbjct 3488536 CACACCGACTTTGCTTGCTTGCTGTTCTC---TCACTTGAACCAC-CGCCCCGACAAGCA 3488481 Query 26073 GACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNN 26132 || |||| | ||||||| ||||| || | || ||| ||||||| Sbjct 3488480 GATCGTCCAGGACATCATCACTGAGGCCGTCGCTATTGAGCAGGAGTTCTTGACTGACGC 3488421 Query 26133 NNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGT 26192 | ||||||||| || ||||||| ||| ||||| |||| || Sbjct 3488420 TCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGAGTTCGT 3488361 Query 26193 GGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC-AGTACGC--CTAACCC 26249 ||||||| ||| ||| | |||| ||||| ||| | |||| | ||||| Sbjct 3488360 TGCCGACCGTCTCCTGGTCGCATTGGG--CAACCAGA-AGTACTACCACGCCACCAACCC 3488304 Query 26250 GTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGT 26309 |||||||| ||||| ||||| || ||| || |||||||||||||| || ||| | || Sbjct 3488303 CTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGT 3488244 Query 26310 CGGCGACTATCA 26321 || ||||| || Sbjct 3488243 TGGTGACTACCA 3488232 Score = 89.7 bits (98), Expect = 1e-12 Identities = 161/234 (69%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||||||||| || ||| Sbjct 3489131 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAGATCGACCTG 3489072 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 | ||||| || ||| |||| | ||| || | | ||||||| | || || Sbjct 3489071 TCGAAGGATCTGCACGACTGGAACAACCGC-CTGAACGATGACGAGCGTTACTTCATCTC 3489013 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| || ||||| ||||| ||||| ||| ||| | Sbjct 3489012 CCACGTCCTTGCCTTCTTCGCCGCCTCGGACGGTATTGTGAATGAGAACCTGCTTGAGCG 3488953 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | || || ||| | || || || ||||||||||||||||| Sbjct 3488952 TTTCAGTGGTGAGGTTCAGGTCCCCGAAGCTCGTTGCTTCTACGGTTTCCAGAT 3488899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844660673280