Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4 127 1e-24 seq7 93.3 3e-14 seq5 87.8 1e-12 >seq4 Length=3958284 Score = 127 bits (140), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | |||||||||||||| ||||| ||||| || || ||||| |||| Sbjct 2112238 AGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCT 2112179 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || || ||||| |||| | ||||| ||||| Sbjct 2112178 TCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCC 2112119 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG----CCTCGACATCAACGGTTAT 34941 | || || ||||| | | |||||| | | ||||| || | || || Sbjct 2112118 TGAATCTTGCTCTTGAC----GTTGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGAT 2112063 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| ||||||||||| || ||||||||||| Sbjct 2112062 TGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 2112027 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| || ||||| ||||| |||||||| ||| | || |||| Sbjct 2112010 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCC 2111951 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||| || || || || ||||| | || | ||| ||||| || Sbjct 2111950 TCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCT 2111891 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | |||| || | ||| || || | || || ||| Sbjct 2111890 TGGATCTTTGACTTGACGTTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTC 2111831 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| || || |||||||| Sbjct 2111830 TTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2111799 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | |||| ||||||||||||||| ||||| || || | || |||| || Sbjct 2111779 ACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGACCATCCTCG 2111720 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| ||||||||||||| || || ||||| | || | |||||||| || | Sbjct 2111719 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCCTTATCCTGG 2111660 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || ||||| || ||||||| || ||| ||| || || | ||| ||||| Sbjct 2111659 ATCTTCGACTTGAC--AT--TATCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGT 2111604 Query 34945 CTTTCCCGTGAGGGTCTTTAC 34965 ||| || || |||||||| || Sbjct 2111603 CTTGCCAGTAAGGGTCTTGAC 2111583 Score = 100 bits (110), Expect = 2e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| ||||||||| ||||| ||||| || || ||||| |||| Sbjct 2111489 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCT 2111430 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || || ||||| |||| | ||||||||||| Sbjct 2111429 TCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATTCCCTCCTTGTCT 2111370 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | | |||||| |||| || |||||| Sbjct 2111369 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTC 2111310 Query 34946 TTTCCCGT 34953 || || || Sbjct 2111309 TTGCCGGT 2111302 >seq7 Length=2280749 Score = 93.3 bits (102), Expect = 3e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | ||| ||||||||| ||||| |||||||| || |||| | || Sbjct 1003018 CAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTC 1003077 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || || ||||| | || | ||||||||||| Sbjct 1003078 CTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGGGGGATTCCCTCCTTGTC 1003137 Query 34885 GTTTATTTT 34893 |||| || Sbjct 1003138 TATTATCTT 1003146 >seq5 Length=1114898 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| |||| |||| || || ||||| || ||||||| Sbjct 143179 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 143238 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || || ||||| | || | |||||||| || | || || |||||| Sbjct 143239 TCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 143298 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | ||| || || | ||| |||||||| ||||| |||||||| || | Sbjct 143299 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 143358 Query 34968 A 34968 | Sbjct 143359 A 143359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692752367428