Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 9e-16 seq9 84.2 2e-11 >seq4 Length=3958284 Score = 98.7 bits (108), Expect = 9e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| ||||| || | | | ||||| || ||||||||||||||| || || Sbjct 2111792 ACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 2111733 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| |||||||| || |||| |||| | ||||||||| || ||||| ||||| Sbjct 2111732 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCC 2111673 Query 132022 TTCTTTATC 132030 || ||||| Sbjct 2111672 CTCCTTATC 2111664 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| || |||||| ||| || ||||| || |||| Sbjct 2111992 GATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCG 2111933 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||||||||| || ||||| || ||||| ||||| || ||| || | Sbjct 2111932 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGACTTGACG 2111873 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || ||||||||| | || | || || || || || || || Sbjct 2111872 TTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTA 2111813 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 2111812 ACGAAAATCTGCAT 2111799 >seq9 Length=3715394 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 47065 AGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGT 47124 ||||||| || |||| || || || |||||| |||| ||||||||||| || ||| Sbjct 3488439 AGGAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGA 3488380 Query 47125 GCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGACAACC-GAAATA 47182 | | || || ||||| || || || ||||| |||| ||| | || ||||| ||| || Sbjct 3488379 CCCAGTACATCGAGTTCGTTGCCGACCGTCTCCTGGTCGCA--TTGGGCAACCAGAAGTA 3488322 Query 47183 TTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAA 47242 | | || || || || || || ||| | ||||| || || | ||||| ||||| Sbjct 3488321 CTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAA 3488262 Query 47243 TTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || |||||||| || || || || || Sbjct 3488261 CTTCTTCGAGAAGCGTGTTGGTGACTA 3488235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611128508320