Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq4 159 1e-33 seq3 113 1e-19 seq11 104 7e-17 >seq4 Length=3958284 Score = 159 bits (176), Expect = 1e-33 Identities = 609/950 (64%), Gaps = 17/950 (2%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || || || ||||| || || || ||||| | ||| | | |||| | Sbjct 3307450 CCGCCGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTGTTCCGTGATGACC 3307391 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 || | ||||| || || || || || |||||| | || || || || | |||||| || | Sbjct 3307390 GTATCGAAATCATCGCCAACGACCAGGGTAACCGTACTACCCCCTCGTTCGTTGCTTTCA 3307331 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 3307330 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTCACA 3307271 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTT------TTCTGACAAATCTA 349430 | || || || ||||| ||||| || || ||| | ||| | |||| || Sbjct 3307270 ACACCGTCTTCGATGCCAAGCGTCTCATCGGTCGTCGTTACAACGATGCTGAGG--TC-- 3307215 Query 349431 CACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAA 349490 || |||| | || || | || || | | || | | || |||| || || Sbjct 3307214 --CAGGCTGACATGAAGCACTACCCCTTCAAGATCGT-CGACCAG--GGTGGCAAGCCCG 3307160 Query 349491 TTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAA 349550 | | |||||||| | || ||||| || || || | ||||| || || || || | Sbjct 3307159 TCGTCGAGGTTGAGTTCAAGGGTGAGACCAAGCAGTTCTCTCCCGAGGAGATCTCTTCCA 3307100 Query 349551 TGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATG 349610 || | | || || ||| || | ||||| || || | |||| || || | | | Sbjct 3307099 TGATCCTCGTCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACCGTCAACAACG 3307040 Query 349611 CTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTG 349670 | || || ||||| || ||||| || | || | |||||| || || || || | | Sbjct 3307039 CCGTCATCACTGTCCCCGCCTACTTCAGCGACTCTCAGCGTCAGGCTACCAAGGACTCCG 3306980 Query 349671 GCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTG 349730 | |||||| || | || || || | || || || || ||||| ||||| || || | Sbjct 3306979 GTCTCATTGCCGGTCTGAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCCGCCATCG 3306920 Query 349731 CATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790 | ||||| ||||| || | | |||| || || |||| || || || || |||| Sbjct 3306919 CCTATGGTCTTGACAAGAAGGGTGAGGGCGAGCGTAACGTTCTCATCTTCGACTTGGGTG 3306860 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 ||||||| || ||||| || || || || |||| ||||| || || || || || || | Sbjct 3306859 GTGGTACCTTCGATGTTTCTCTTCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCCA 3306800 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 | |||||||| || || | ||||| || || || || || ||||| || || || | Sbjct 3306799 CCGCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCG 3306740 Query 349911 TTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | || || || ||||| ||||| || | || | || || | || | ||| Sbjct 3306739 TCAACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACTACCAACGCTCGTGCTCTCCGT 3306681 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | ||||| || || ||||| ||||| | | || ||| | | || ||||| Sbjct 3306680 CGTCTCCGTACTGCTTGCGAGCGTGCGAAGCGCACTCTCTCCTCTGCCGCTCAGACCTCC 3306621 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || || || || || || || || | || |||| | || || || ||||| || Sbjct 3306620 ATCGAGATCGACTCGCTCTTCGAGGGTATTGACTTCTACACCTCGATCACCCGTGCCCGT 3306561 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGA 350139 || || ||| | || ||| || || | | || ||||| || || || Sbjct 3306560 TTCGAGGAACTCTGCCAGGACCTCTTCCGTGGCACCATGGAGCCCGTTGA 3306511 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || ||||| || || || || || Sbjct 2112029 CATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 2111970 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || ||||| || || || ||||| || || || || Sbjct 2111969 CGACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGG 2111910 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || ||||| ||||| || || || | || || || || |||| || || | || Sbjct 2111909 AGGGATCCCTTCCTTATCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCCGACGACTC 2111850 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | |||||||||||||| || || || ||||||||||| Sbjct 2111849 CACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2111799 Score = 102 bits (112), Expect = 2e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || || || || || || || | || ||||||||||| | || || ||||| || Sbjct 2112218 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAA 2112159 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACAT 140664 ||| ||||| || || || || || || || ||||| |||||||| || ||| || || | Sbjct 2112158 GATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCCTGAATCTT-GCTCTTGACGT 2112100 Query 140665 TATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTA 140724 | || || | || || ||| ||||| | ||| | ||||||||| || || || || | Sbjct 2112099 TGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGA 2112040 Query 140725 CAAAAATCTGCAT 140737 | || |||||||| Sbjct 2112039 CGAAGATCTGCAT 2112027 Score = 93.3 bits (102), Expect = 1e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | | || | || | || ||||| || ||||| || || || Sbjct 2111801 CATACCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTC 2111742 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || || || || || || ||||| | ||| || || ||||| Sbjct 2111741 GGACAGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGG 2111682 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 |||||| || || |||||||| || || | || |||||||| || | || | ||| | Sbjct 2111681 AGGAATGCCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATGGTGTC-GCTGGACT 2111623 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 |||| || || || | ||||| || || || || || || Sbjct 2111622 CAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 2111583 Score = 89.7 bits (98), Expect = 2e-12 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| || || || |||||||| || || || || || || Sbjct 2111508 CATGCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC 2111449 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || ||||||||||| | || || ||||| ||||| ||||| || || || || Sbjct 2111448 GGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGG 2111389 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || ||||| || || || || || || ||| || || || || || | || | | Sbjct 2111388 CGGGATTCCCTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCGCTCGACT 2111330 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || ||||| || | ||||| ||||| Sbjct 2111329 CGACCTCAAGAGTGATGGTCTTGCCGGT 2111302 >seq3 Length=2614642 Score = 113 bits (124), Expect = 1e-19 Identities = 322/492 (65%), Gaps = 5/492 (1%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||||| || || ||||| || || || || |||| | || || || || ||| Sbjct 1729648 GCTGTTATCACCGTGCCAGCTTACTTCAACGACAACCAGAGACAGGCTACCAAGGACGCT 1729589 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||| | || | |||||||| | || || || || || || |||||||||||| Sbjct 1729588 GGTGCCATTTCTGGCCTGAATGTTCTGCGGATCATCAACGAGCCGACAGCTGCAGCAATT 1729529 Query 349730 GCATATGGGCTTGAT---AAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| | || | |||| | || || | | |||| ||| | Sbjct 1729528 GCTTATGGTCTTGGTTCCGGAAAGTCTGACAAGGAGCGTAACGTGTTGATTTATGACCTG 1729469 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || | | |||| | ||| || |||| || || Sbjct 1729468 GGTGGTGGTACTTTCGATGTGTCTTTGTTGAACA-TCCAAGGTGGTGTTTTCACTGTCAA 1729410 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||||||||| || || |||||||| | || ||||| | ||| || ||| Sbjct 1729409 GGCTACTGCTGGTGACACCCACCTTGGTGGTCAGGACTTTGACACCAACCTCCTTGAGCA 1729350 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAAT 349965 || |||||||| || | | | || || | | | | |||| || | Sbjct 1729349 CTTCAAGAAAGAATTCCAGAGAAAGACCGGAAAGGACTTGTCTGGTGACGCTAGGGCCCT 1729290 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 |||||||| ||||| || ||||||||||| |||||| || | || | ||||| || Sbjct 1729289 TCGTCGCCTGAGAACAGCTTGTGAACGTGCCAAGCGTACCCTGTCCAACGCAACCCAGAC 1729230 Query 350026 CTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGC 350085 | |||| || || |||||| || || | |||||| | || | || ||||| Sbjct 1729229 TACCGTTGAGATCGACTCTCTTTTCGACGGAGATGATTTCAACACTTCCGTCACTCGTGC 1729170 Query 350086 TCGGTTTGAAGA 350097 ||| || || || Sbjct 1729169 TCGTTTCGAGGA 1729158 >seq11 Length=3207021 Score = 104 bits (114), Expect = 7e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| | ||| || || ||||||||||| | ||| |||||||| |||| Sbjct 821524 ATGTAACCAGTTTCAGCAGTCTTGACAGCAGTATCAATAAGACCCTCACGACCAGCCATG 821465 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 || |||||||| ||||| || ||||| | |||| | | || |||||| ||| || Sbjct 821464 GCGTGGAAGAAGAATTCGGTTGGAGTCAAGCCACGCAAGTACGAGTTCTCAACAAACCCA 821405 Query 378352 CTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGAT-TCTCAAACCC 378410 | | ||||||| | || | || || | || || ||||| |||| | | ||||| Sbjct 821404 CGGGACTCTGGCGAGTAGTCGTCCTTGGTGAAGTGCGGCAATGTCCGATATTTGAAACCG 821345 Query 378411 ATATGGAATTCGTTTTCCATCAACATTCTGTTGACC 378446 | | ||||| || ||||| ||||| |||||| || Sbjct 821344 A-AGGGAATACGCTTTCCTTCAACGGACTGTTGTCC 821310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254167029636