Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001693355.1_202016-07-27] 12 sequences; 27,779,015 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4 147 5e-30 seq5 105 2e-17 >seq4 Length=3958284 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| || ||||| || || ||||| || ||| Sbjct 2111802 CAGATTTTCGTTAAGACCCTAACCGGAAAGACTATCACTCTGGAAGTGGAGTCGTCGGAC 2111861 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || || || ||||| |||||||| ||||| || Sbjct 2111862 ACGATCGACAACGTCAAGTCAAAGATCCAAGATAAGGAAGGGATCCCTCCCGACCAACAG 2111921 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||| ||||| || ||||| | || || | || || ||| || Sbjct 2111922 CGTCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGTACCCTGTCGGACTACAACATC 2111981 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || || ||||| Sbjct 2111982 CAGAAAGAATCCACTCTTCACCTTGT 2112007 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| || ||||| | || || ||||| || ||| Sbjct 2112030 CAGATCTTCGTCAAGACCCTCACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCCGAC 2112089 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||||||||||||||| || ||||| |||||||| || Sbjct 2112090 ACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAACAG 2112149 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||| | |||||||| | ||||| |||| || ||| || Sbjct 2112150 CGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGCGCACTCTCTCCGACTACAACATC 2112209 Query 178104 CAAAAAGA 178111 || || || Sbjct 2112210 CAGAAGGA 2112217 Score = 116 bits (128), Expect = 9e-21 Identities = 140/189 (74%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || ||||| || ||||| || ||| ||||||||||| |||||||| Sbjct 2111302 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGC---GACACCATCGACAACGTCAAG 2111358 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| || ||||| || |||||||| |||||||| || || || |||||||| || Sbjct 2111359 AGCAAGATCCAAGACAAGGAGGGAATCCCGCCGGACCAACAGCGTCTCATCTTCGCTGGT 2111418 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || ||| | |||||||| | ||||| |||| || ||| |||| || || || || || Sbjct 2111419 AAGCAGTTGGAAGATGGGCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTC 2111478 Query 178122 CATCTTGTT 178130 || || ||| Sbjct 2111479 CACCTGGTT 2111487 Score = 114 bits (126), Expect = 3e-20 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||||||||| || | |||||||||| Sbjct 2111581 TCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCG 2111640 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| ||||| ||||| || || || || ||||| ||||| || || | | Sbjct 2111641 ATAATGTCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAACAGCGTTTGA 2111700 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||||||||| || |||||||| ||||| | || || |||| || ||| | || || | Sbjct 2111701 TCTTCGCCGGCAAGCAGCTCGAGGATGGTCGTACGCTGTCCGACTACAACATTCAGAAGG 2111760 Query 178111 AATCAACACTGCATCTTG 178128 | || || |||| |||| Sbjct 2111761 AGTCCACCTTGCA-CTTG 2111777 >seq5 Length=1114898 Score = 105 bits (116), Expect = 2e-17 Identities = 134/183 (73%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 143360 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 143304 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| ||||| || || || ||||| |||||||| || || Sbjct 143303 CATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGACCAACAGCG 143244 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 143243 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 143184 Query 178106 AAA 178108 || Sbjct 143183 GAA 143181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731014926328