Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 seq45 82.4 5e-11 >seq1 Length=5851576 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 |||||| || || | || |||||||| | || || || ||||| |||||||||||||| Sbjct 2108309 TCCGCCACGGAGACGAAGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGA 2108250 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGG 34280 || || | || ||||||||||| || ||||| ||||| ||||| |||| || ||| Sbjct 2108249 GAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGG 2108190 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | | ||| ||||| ||||| ||| | | | | || | |||| ||||| Sbjct 2108189 G-ATACCCTCTTTGTCCTGAATCTTGCTCTTGACGTTGTCGATTGTGTCGGAACTTTCGA 2108131 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| || || || ||||| || || || ||||||||||| Sbjct 2108130 CTTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 2108082 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| ||||||||| ||||||||||| ||||| ||| | || Sbjct 2108065 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCC 2108006 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||||||||| ||||| |||||| || | | ||||| || Sbjct 2108005 TCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCT 2107946 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | |||| || | ||| || || |||| ||||| || Sbjct 2107945 TGGATCTTTGACTTGACGTTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTC 2107886 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || || || || || |||||||| Sbjct 2107885 TTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2107854 Score = 100 bits (110), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | ||| || ||||| |||||||||||||| || || | || Sbjct 2107544 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCT 2107485 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTC 34296 ||||||||||| || ||||| ||||| ||||| |||| || |||| | | ||||||||| Sbjct 2107484 TCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGG-ATTCCCTCCTTGTC 2107426 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | | | | || | ||| |||| ||||| || | |||||||| Sbjct 2107425 TTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGT 2107366 Query 34357 TTTGCCGGT 34365 |||||||| Sbjct 2107365 CTTGCCGGT 2107357 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||| ||| || || || ||||| ||||||||||||||| Sbjct 2107852 CCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 2107793 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| ||||| || | ||||| ||||| || Sbjct 2107792 AGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGA 2107733 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | || | || | ||| | || || || Sbjct 2107732 ATGCCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGACTCAACC 2107673 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| ||||| || || || || || Sbjct 2107672 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 2107638 >seq45 Length=2308221 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| ||||| | || || ||||| ||||||||||| || Sbjct 1966215 CCACCACGCAGGCGCAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1966156 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| |||||| || ||||| || || ||||| ||||| ||| Sbjct 1966155 AGAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGGGGG 1966096 Query 34283 ACGCTCTCCTTGTCGGCTATCTT 34305 | | ||||||||| |||||| Sbjct 1966095 ATTCCCTCCTTGTCTATTATCTT 1966073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071732254080