Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq12 223 3e-53
seq66 172 5e-38
seq1 86.0 6e-12
>seq12
Length=3061394
Score = 223 bits (246), Expect = 3e-53
Identities = 491/732 (67%), Gaps = 8/732 (1%)
Strand=Plus/Plus
Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGC 23308
||||| | ||| | || ||||| || ||||||| |||||||| ||| || | |
Sbjct 2886373 TACTTCTCGTAGAGAGCCTCAAACTCTTCACCGTACACGTCGGCCAAGCCAGGAGCCTCG 2886432
Query 23309 ATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGT 23368
| || || | |||| |||| || ||||| || |||| || | || ||
Sbjct 2886433 CTAGGGCAGAAGAGAGTCCAGTCACCGTTGGACTCAACACGCTTCATGAACAAGTCGGGA 2886492
Query 23369 ATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC 23428
|||| | ||||||||||| || || || | |||||||| || || |||||| |
Sbjct 2886493 GTCCACAAGGCGTAGAACAGGTCACGAGCTCTGACCTCCTCCTTACCATGGTTCTTGCGC 2886552
Query 23429 AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCC 23488
| |||||| || || || ||||||| ||||| ||||| ||||| | |||||| || ||
Sbjct 2886553 AGATCCAAGAACTCGAAGACGTCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCA 2886612
Query 23489 GGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATC 23548
|| | ||| ||||| ||||| |||||||| | || |||||||||||||| | |||||
Sbjct 2886613 GGACGCTTGTTGCCTCCCTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATA 2886672
Query 23549 GGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAAC 23607
|| |||||||||||||| | ||| | |||||| | || ||| | | || |
Sbjct 2886673 GGGACGAGACCGTTGGAGGTACCG-TTGGTTCCGCCAATGTAGGAGCCTGTCGAACGGAT 2886731
Query 23608 GTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667
| ||| |||| || ||| || || ||| | | ||| || ||||| || || |||||
Sbjct 2886732 GCGGTGGACGTTGAGACCAATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAG 2886791
Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727
||||| ||||| |||||||| ||||| | || | |||| | ||| ||||| | ||
Sbjct 2886792 GGTGTCATAGATACCCTCGATACTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAA 2886851
Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787
|| | | || ||| | || |||||| || ||| || || || |||||| |
Sbjct 2886852 CTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTGGGGGATGCATGGGTGAAGTATTTCTG 2886911
Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847
||||| | | ||| || || || || |||||||| ||||| || || | ||
Sbjct 2886912 GGACATCAAGTGGTATGTCTCAATTGCCCTCTCAATGTCACTACCGTGGATTCCAACAGC 2886971
Query 23848 GACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAG 23904
|| ||||||| || || ||||| | || | ||| | || | ||| | |||
Sbjct 2886972 AACCCGCATCAGCAGGTGCTGAGGACGCTCAGCAACCTT---TCCATCGATTCGCAGCAG 2887028
Query 23905 ATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCAC 23964
||||| || | | || || || || || ||| ||||| || ||||| |||| |||
Sbjct 2887029 GTATGACCGCTCAAGAGTCTTGAAACCGAAGAAGTTGTAGTTGAAATCACGGTCGTACAC 2887088
Query 23965 TATGGCCGAATT 23976
|| || || ||
Sbjct 2887089 GATAGCAGAGTT 2887100
>seq66
Length=1272724
Score = 172 bits (190), Expect = 5e-38
Identities = 294/419 (70%), Gaps = 12/419 (3%)
Strand=Plus/Minus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||||||||| || ||||| ||||| || ||| || || | || || ||| ||
Sbjct 1040987 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGCTG 1040928
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||||||||||| || || || || ||||||| |||| || || ||||||
Sbjct 1040927 AAGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGTGACGAG 1040868
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG--TCAATAAACCGACGC 58158
|||||||| || || ||||| ||| | ||| ||||||| ||| || |||||
Sbjct 1040867 GGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCAC-TTGAACCACCGCCCCGACAA 1040809
Query 58159 G-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217
| ||||| || |||||| ||||| ||||| ||||| || || | ||||| | ||
Sbjct 1040808 GCAGATCG--TCCAGGACATCATCACTGAGGCCGTCGCTATTGAGCAGGAGTTCTTGACT 1040751
Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277
|| || || || || ||| ||||||| |||||| | | ||| | ||||||| |||
Sbjct 1040750 GACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGAG 1040691
Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTAC-AACACG--AAA 58334
|| ||||||||| | || || ||| | || || | | | ||| | |||| |
Sbjct 1040690 TTCGTTGCCGACCGTCTCCTGGTCGCATTG---GGCAACCAGAAGTACTACCACGCCACC 1040634
Query 58335 AATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393
|| || || || || ||| | ||||| || | |||||||| ||||| ||||| ||
Sbjct 1040633 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAA 1040575
>seq1
Length=5851576
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || || || || ||||| | || || ||| |||
Sbjct 2108082 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCC 2108141
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||| || || | ||||| |||||
Sbjct 2108142 GACACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAA 2108201
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || |||||||| || |||||||||||
Sbjct 2108202 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGA 2108236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766021098560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |