Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq12 223 3e-53 seq66 172 5e-38 seq1 86.0 6e-12 >seq12 Length=3061394 Score = 223 bits (246), Expect = 3e-53 Identities = 491/732 (67%), Gaps = 8/732 (1%) Strand=Plus/Plus Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGC 23308 ||||| | ||| | || ||||| || ||||||| |||||||| ||| || | | Sbjct 2886373 TACTTCTCGTAGAGAGCCTCAAACTCTTCACCGTACACGTCGGCCAAGCCAGGAGCCTCG 2886432 Query 23309 ATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGT 23368 | || || | |||| |||| || ||||| || |||| || | || || Sbjct 2886433 CTAGGGCAGAAGAGAGTCCAGTCACCGTTGGACTCAACACGCTTCATGAACAAGTCGGGA 2886492 Query 23369 ATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC 23428 |||| | ||||||||||| || || || | |||||||| || || |||||| | Sbjct 2886493 GTCCACAAGGCGTAGAACAGGTCACGAGCTCTGACCTCCTCCTTACCATGGTTCTTGCGC 2886552 Query 23429 AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCC 23488 | |||||| || || || ||||||| ||||| ||||| ||||| | |||||| || || Sbjct 2886553 AGATCCAAGAACTCGAAGACGTCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCA 2886612 Query 23489 GGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATC 23548 || | ||| ||||| ||||| |||||||| | || |||||||||||||| | ||||| Sbjct 2886613 GGACGCTTGTTGCCTCCCTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATA 2886672 Query 23549 GGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAAC 23607 || |||||||||||||| | ||| | |||||| | || ||| | | || | Sbjct 2886673 GGGACGAGACCGTTGGAGGTACCG-TTGGTTCCGCCAATGTAGGAGCCTGTCGAACGGAT 2886731 Query 23608 GTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAG 23667 | ||| |||| || ||| || || ||| | | ||| || ||||| || || ||||| Sbjct 2886732 GCGGTGGACGTTGAGACCAATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAG 2886791 Query 23668 AGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACAT 23727 ||||| ||||| |||||||| ||||| | || | |||| | ||| ||||| | || Sbjct 2886792 GGTGTCATAGATACCCTCGATACTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAA 2886851 Query 23728 TTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATT 23787 || | | || ||| | || |||||| || ||| || || || |||||| | Sbjct 2886852 CTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTGGGGGATGCATGGGTGAAGTATTTCTG 2886911 Query 23788 CGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGC 23847 ||||| | | ||| || || || || |||||||| ||||| || || | || Sbjct 2886912 GGACATCAAGTGGTATGTCTCAATTGCCCTCTCAATGTCACTACCGTGGATTCCAACAGC 2886971 Query 23848 GACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAG 23904 || ||||||| || || ||||| | || | ||| | || | ||| | ||| Sbjct 2886972 AACCCGCATCAGCAGGTGCTGAGGACGCTCAGCAACCTT---TCCATCGATTCGCAGCAG 2887028 Query 23905 ATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCAC 23964 ||||| || | | || || || || || ||| ||||| || ||||| |||| ||| Sbjct 2887029 GTATGACCGCTCAAGAGTCTTGAAACCGAAGAAGTTGTAGTTGAAATCACGGTCGTACAC 2887088 Query 23965 TATGGCCGAATT 23976 || || || || Sbjct 2887089 GATAGCAGAGTT 2887100 >seq66 Length=1272724 Score = 172 bits (190), Expect = 5e-38 Identities = 294/419 (70%), Gaps = 12/419 (3%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||||||||| || ||||| ||||| || ||| || || | || || ||| || Sbjct 1040987 GCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGCTG 1040928 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||||||| |||| || || |||||| Sbjct 1040927 AAGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGTGACGAG 1040868 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG--TCAATAAACCGACGC 58158 |||||||| || || ||||| ||| | ||| ||||||| ||| || ||||| Sbjct 1040867 GGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCAC-TTGAACCACCGCCCCGACAA 1040809 Query 58159 G-GGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 | ||||| || |||||| ||||| ||||| ||||| || || | ||||| | || Sbjct 1040808 GCAGATCG--TCCAGGACATCATCACTGAGGCCGTCGCTATTGAGCAGGAGTTCTTGACT 1040751 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || || || || ||| ||||||| |||||| | | ||| | ||||||| ||| Sbjct 1040750 GACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACCCAGTACATCGAG 1040691 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTAC-AACACG--AAA 58334 || ||||||||| | || || ||| | || || | | | ||| | |||| | Sbjct 1040690 TTCGTTGCCGACCGTCTCCTGGTCGCATTG---GGCAACCAGAAGTACTACCACGCCACC 1040634 Query 58335 AATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || || || || || ||| | ||||| || | |||||||| ||||| ||||| || Sbjct 1040633 AACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAA 1040575 >seq1 Length=5851576 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| | || || ||| ||| Sbjct 2108082 ATGCAGATCTTCGTCAAGACCCTCACTGGAAAGACAATCACATTGGAAGTCGAAAGTTCC 2108141 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||| || || | ||||| ||||| Sbjct 2108142 GACACAATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGTATCCCGCCGGACCAA 2108201 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || |||||||| || ||||||||||| Sbjct 2108202 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGA 2108236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766021098560