Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq66 143 4e-29 seq12 96.9 5e-15 >seq66 Length=1272724 Score = 143 bits (158), Expect = 4e-29 Identities = 293/433 (68%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || ||||| ||||||||||| ||||| |||||||| || || || || | ||||| Sbjct 1040993 CTCGTGGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTC 1040934 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || || || | |||||| | || ||||| Sbjct 1040933 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGT 1040874 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 |||||||| || ||| |||||||| | ||||| || || | | | || ||| Sbjct 1040873 GACGAGGGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCACTTGAACCACCGCCCC 1040814 Query 125604 GA-GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || ||||||| | ||| ||||| | || || ||||| || || Sbjct 1040813 GACAAGCAGATC-------GTCCAGGACATCA------TCACTGAGGCCGTCGCTATTGA 1040767 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| | || || | || || ||| | || | ||||||||| |||||| || Sbjct 1040766 GCAGGAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCAT 1040707 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGAT 125782 | | ||||||| ||||| || || || ||||| ||| || ||| || ||| Sbjct 1040706 GACCCAGTACATCGAGTTCGTTGCCGACCGTCTCCTGGTCGCATTGGGCAACCAGAAGTA 1040647 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 ||| |||||| || ||||| || |||||| | ||| || || | || |||||||| Sbjct 1040646 CTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAA 1040587 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 1040586 CTTCTTCGAGAAG 1040574 >seq12 Length=3061394 Score = 96.9 bits (106), Expect = 5e-15 Identities = 215/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864 ||| ||||| | | ||| || || || || |||||| | ||||||| || || | Sbjct 2886702 AACCAACGGTACCTCCAACGGTCTCGTCCCTATGCTCCGCGTGTACAACAACACTGCTA- 2886644 Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||| ||||| || || || || ||| | ||| ||||| | || || | Sbjct 2886643 GATACGTCGACCAGGGAGGCAACAAGCGTCCTGGTGCTTTTGCCATCTACCTTGAGCCCT 2886584 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||| ||||||| || || || | || ||||||| ||| ||| || |||| Sbjct 2886583 GGCACTCGGACGTCTTCGAGTTCTTGGATCTGCGCAAGAACCATGGTAAGGAGGAGGTCA 2886524 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA-- 97042 |||| | ||| |||| || || | ||| || || |||||||||||||| || | Sbjct 2886523 GAGCTCGTGACCTGTTCTACGCCTTGTGGACTCCCGACTTGTTCATGAAGCGTGTTGAGT 2886464 Query 97043 -CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 | |||||| |||||| || | ||||| | | | || || || |||| | Sbjct 2886463 CCAACGGTG---ACTGGACTCTCTTCTGCCCTAGCGAGGCTCCTGGCTTGGCCGACGTGT 2886407 Query 97102 GGGGCGAAGAGTTTGAGGC 97120 || |||||||||||||| Sbjct 2886406 ACGGTGAAGAGTTTGAGGC 2886388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058570099680