Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
>seq1
Length=5851576
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 5290225 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5290284
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 5290285 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5290319
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 5297942 AAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5298001
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 5298002 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5298036
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
|||| || || ||||||||||| || || ||||| || || | | || | || ||
Sbjct 2108290 ACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCC 2108231
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
|| || || || || || || || || ||||| || | |||| || ||||||||| |
Sbjct 2108230 AACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCCTGA 2108171
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288
|| || ||| || || | || || || |||||| ||||| ||||| || || ||
Sbjct 2108170 ATCTTGCTCTTGACGTTGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTT 2108111
Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | ||| || ||||| ||||||||
Sbjct 2108110 CCAGTGAGGGTCTTGACGAAGATCTGCAT 2108082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946922412508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |