Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq34 125 1e-23 seq66 113 9e-20 seq1 87.8 4e-12 >seq34 Length=2316641 Score = 125 bits (138), Expect = 1e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || ||||||| ||||| |||| ||| Sbjct 2043037 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 2043096 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || |||||| ||||||||||| | || || ||||| |||||||||| || | Sbjct 2043097 CAGACTCGCCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTGCTCGGTCCCAACGGTACC 2043156 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 2043157 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 2043216 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 || || | ||| ||||| || ||||||||| ||||| || Sbjct 2043217 GACGAAGTCAAGACCGTGTACGTCGAGCACGACCTCGACGCC 2043258 >seq66 Length=1272724 Score = 113 bits (124), Expect = 9e-20 Identities = 273/405 (67%), Gaps = 14/405 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 1040578 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1040637 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || | ||| | ||| | | ||| | ||| || | || ||||| || || ||||| | Sbjct 1040638 GCGTGGTAGTACTTCTGGTTGCCCAATGCGACCAGGAGACGGTCGGCAACGAACTCGATG 1040697 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA-TACGACAAGGAATTGCCTCACAGAT 251741 ||||| ||| || | | ||||||||| | || |||| ||| | || ||| | Sbjct 1040698 TACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGGGCGAC-AGGGAGAGCGTCAGTCAA 1040756 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC---CTG--TGCCAGA 251796 ||| |||| || | || || ||||| | || ||| || ||| || | | Sbjct 1040757 GAACTCCTGCTCAATAGCGACGGCCTCAGTGATGATGTCCTGGACGATCTGCTTGTCGGG 1040816 Query 251797 GACAGCTTGTTCTCCAGCTTTGAGTACAG-GAGCTCGCCAAACTGTTGGTGCAGACCCTC 251855 | | | ||| || | ||| |||| ||| | |||| | ||| |||||||| Sbjct 1040817 G--CGGTGGTT---CAAGTGAGAGAACAGCAAGCAAG-CAAAGTCGGTGTGGAGACCCTC 1040870 Query 251856 GTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 ||| ||| ||| | ||||||||| | || |||||||||| ||||| ||| | || Sbjct 1040871 GTCACGAGAGATCAGCTCGTTGGAGAAGGTAAGACCAGGCATCAGGCCACGCTTCTTCAG 1040930 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 ||||||||| | | || || |||||||| | | |||||| || Sbjct 1040931 CCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATACCCTCAAC 1040975 >seq1 Length=5851576 Score = 87.8 bits (96), Expect = 4e-12 Identities = 227/341 (67%), Gaps = 10/341 (3%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||| ||| ||||||| | | |||| || || | | | | ||||| || Sbjct 203124 GATGAGCGTAAGGAATGGCTGCGCCAATTCCGTCCGGGTACCTACCTTGACCACTCCGTC 203065 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| ||| || | | ||||||||| |||||||| | ||||| ||| | |||| | Sbjct 203064 GCCAAGATCACCTACACGGACTTCATCAACAAGGAGTTGATTCTGTTCAGTATGGCGG-A 203006 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 | | | || || || ||| || |||||||| || ||||| ||||||||| | Sbjct 203005 TAACATT---CGGTCCATCCCCTCGGTTGTGGATGGTCTGAAGCCCGGTCAGCGTAAGGT 202949 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 ||| | | || ||| ||| ||||| | || || ||||||| | || |||| Sbjct 202948 CCTGTATACCTGTTTCCGGCGCAACCTTAAGAAGGATATGAAGGTCGTCGAATTGGCTGG 202889 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGA-GCAGAGTCTGCAGGGTGCCATTG 218734 | | || || | || | | ||||||||||||||| || | ||||| | |||| Sbjct 202888 TCACGTTTCGGGTATGACCGCCTACCATCACGGTGATGCCTCAT-TGCAGCAGACGATTG 202830 Query 218735 TAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 | ||| | || ||||||| ||| || |||||||| ||| Sbjct 202829 TCGGCCTTGCCCAGGACTTTGTCGGTTCGAACAACATCAAC 202789 Score = 87.8 bits (96), Expect = 4e-12 Identities = 114/156 (73%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 217812 GGCTGGCACCAAAAACTCTGGTCTCTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGC 217871 ||| |||||||| || | || |||||| |||||||| || || || || ||||| | Sbjct 203770 GGCCGGCACCAAGGACGGTCATCACTGCACGCTCATCCTTACCGAAGGCGAGTCAGC--C 203713 Query 217872 CACGCT--GGCAACCGCTGGTCTTGCCGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCC 217929 | | | ||| | ||||| | |||||| || |||| || || ||| | |||||| Sbjct 203712 AAGGGTTTGGCCATGGCTGGACGTGCCGTTGTCGGTCCGGATCTGTTCGGTGTTTTCCCC 203653 Query 217930 CTCCGTGGTAAGCTGCTCAACGTGCGCGATGCCTCG 217965 || ||||| |||||||||||||| || ||||| ||| Sbjct 203652 CTGCGTGGAAAGCTGCTCAACGTCCGTGATGCATCG 203617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835904497188