Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 >seq1 Length=5851576 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| ||||| ||| |||||| ||||| ||||| || | ||| || || | Sbjct 2107841 ACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGACC 2107782 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| || | ||||| ||||| | || | || |||||| Sbjct 2107781 ATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCCTT 2107722 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| | | | |||||||| || || || |||| ||||| Sbjct 2107721 ATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGACTCAACCTCGAGGGTGAT 2107662 Query 42173 GGTTTTGCCCGTTAGCGTCTTTAC 42196 ||| ||||| || || ||||| || Sbjct 2107661 GGTCTTGCCAGTAAGGGTCTTGAC 2107638 Score = 96.9 bits (106), Expect = 4e-15 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || ||||| || | ||||| ||| | || || | |||||||||| Sbjct 2108278 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCA 2108219 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 42130 ||||| ||||| ||||| ||||| | || | | ||| |||||| ||| | || | || Sbjct 2108218 GCGAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCC-TGAATCTTGCTCTT 2108160 Query 42131 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 42189 || ||| | | | |||||| ||| || || | ||||| || || || || || | Sbjct 2108159 GA-CGTTGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTGAGGG 2108101 Query 42190 TCTTTACAAAGATTTGCAT 42208 |||| || ||||| ||||| Sbjct 2108100 TCTTGACGAAGATCTGCAT 2108082 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||||| ||| | || || | ||||||||||||||| Sbjct 2107524 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAA 2107465 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||| ||||| | || | | ||||||||| ||| || |||| ||| Sbjct 2107464 GATGAGACGCTGTTGGTCCGGCGGGATTCCCTCCTTGTCTTGGATCTTGCTCTTGA-CGT 2107406 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | ||||||||||| || || || | |||||||| ||||| || Sbjct 2107405 TGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 2107357 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || ||||||||||||||||| | Sbjct 4105634 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 4105693 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||| ||||| | || | | |||||| ||| ||| || |||| ||| | Sbjct 4105694 TCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTG 4105752 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 4105753 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 4105812 Query 42198 AA 42199 || Sbjct 4105813 AA 4105814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212338269120